Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 AC006116.8-202ENST00000587620 1550 ntBASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 AC011467.2-201ENST00000598425 242 ntBASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 TP73-AS1-210ENST00000637775 1455 ntBASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC39BQ5VTQ0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC39BQ5VTQ0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 AL645608.8-201ENST00000606034 2086 ntBASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms