Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 AP000974.1-201ENST00000623909 2387 ntBASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CDC42BPAQ5VT25 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 MMP17-203ENST00000535004 719 ntTSL 3 BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 AC092364.2-202ENST00000597012 1073 ntBASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 DAD1-205ENST00000543337 501 ntTSL 3 BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 AC051619.7-201ENST00000568314 623 ntBASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 AP001059.3-201ENST00000619053 235 ntBASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC26.34■■□□□ 1.81
CDC42BPAQ5VT25 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
CDC42BPAQ5VT25 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CDC42BPAQ5VT25 TNXA-203ENST00000507684 2038 ntBASIC26.33■■□□□ 1.81
CDC42BPAQ5VT25 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC26.33■■□□□ 1.81
CDC42BPAQ5VT25 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
CDC42BPAQ5VT25 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC26.33■■□□□ 1.81
CDC42BPAQ5VT25 FAM185BP-201ENST00000443595 716 ntBASIC26.33■■□□□ 1.81
CDC42BPAQ5VT25 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CDC42BPAQ5VT25 INO80E-210ENST00000567705 880 ntTSL 3 BASIC26.33■■□□□ 1.81
CDC42BPAQ5VT25 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC26.33■■□□□ 1.81
CDC42BPAQ5VT25 AC026120.1-201ENST00000611536 926 ntBASIC26.33■■□□□ 1.81
CDC42BPAQ5VT25 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC26.33■■□□□ 1.81
CDC42BPAQ5VT25 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
CDC42BPAQ5VT25 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CDC42BPAQ5VT25 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.8
CDC42BPAQ5VT25 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.8
CDC42BPAQ5VT25 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.8
CDC42BPAQ5VT25 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC26.32■■□□□ 1.8
CDC42BPAQ5VT25 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDC42BPAQ5VT25 FAM86GP-201ENST00000448322 971 ntBASIC26.32■■□□□ 1.8
CDC42BPAQ5VT25 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CDC42BPAQ5VT25 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDC42BPAQ5VT25 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC26.32■■□□□ 1.8
CDC42BPAQ5VT25 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC26.32■■□□□ 1.8
CDC42BPAQ5VT25 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDC42BPAQ5VT25 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDC42BPAQ5VT25 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
CDC42BPAQ5VT25 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms