Protein–RNA interactions for Protein: Q5SZB4

C9orf50, Uncharacterized protein C9orf50, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50Q5SZB4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 KRT17P7-201ENST00000451704 1104 ntBASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 IGHV3-62-201ENST00000520057 340 ntBASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 IGHV3-71-201ENST00000523324 359 ntBASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 MIR6080-201ENST00000617359 66 ntBASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 ANO7L1-203ENST00000602586 1720 ntBASIC18.69■□□□□ 0.58
C9orf50Q5SZB4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.68■□□□□ 0.58
C9orf50Q5SZB4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.68■□□□□ 0.58
C9orf50Q5SZB4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf50Q5SZB4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf50Q5SZB4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf50Q5SZB4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf50Q5SZB4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.68■□□□□ 0.58
C9orf50Q5SZB4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.68■□□□□ 0.58
C9orf50Q5SZB4 ACTG1P4-201ENST00000425123 1122 ntBASIC18.68■□□□□ 0.58
C9orf50Q5SZB4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
C9orf50Q5SZB4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
C9orf50Q5SZB4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.68■□□□□ 0.58
C9orf50Q5SZB4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf50Q5SZB4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf50Q5SZB4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
C9orf50Q5SZB4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf50Q5SZB4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf50Q5SZB4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf50Q5SZB4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf50Q5SZB4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf50Q5SZB4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 AC241585.1-201ENST00000433527 519 ntBASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 HILS1-202ENST00000545329 423 ntBASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 AC009118.2-201ENST00000613275 655 ntBASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 AL645728.2-201ENST00000641974 660 ntBASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 AC129492.6-201ENST00000611383 1305 ntBASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf50Q5SZB4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf50Q5SZB4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf50Q5SZB4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf50Q5SZB4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf50Q5SZB4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf50Q5SZB4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms