Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 GPX1P2-201ENST00000429271 606 ntBASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 AC112482.1-201ENST00000492080 688 ntBASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 RPS15P9-201ENST00000494093 319 ntBASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.81■□□□□ 0.12
RNFT1Q5M7Z0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 AC097637.2-201ENST00000624096 1997 ntBASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 AC108073.2-201ENST00000464002 357 ntBASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 AC092183.1-201ENST00000469884 875 ntBASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 AC002558.1-201ENST00000488906 803 ntBASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 AL691403.2-201ENST00000618460 490 ntBASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNFT1Q5M7Z0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 AC004832.2-201ENST00000426397 482 ntBASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 IGHV3-65-201ENST00000523210 341 ntBASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 AC008667.4-201ENST00000607370 168 ntBASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.79■□□□□ 0.12
RNFT1Q5M7Z0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.78■□□□□ 0.12
RNFT1Q5M7Z0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNFT1Q5M7Z0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RNFT1Q5M7Z0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNFT1Q5M7Z0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RNFT1Q5M7Z0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.78■□□□□ 0.12
RNFT1Q5M7Z0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms