Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PTPN20Q4JDL3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.52■□□□□ 0.55
PTPN20Q4JDL3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTPN20Q4JDL3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTPN20Q4JDL3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.52■□□□□ 0.55
PTPN20Q4JDL3 AL353593.2-201ENST00000602529 1483 ntBASIC18.52■□□□□ 0.55
PTPN20Q4JDL3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
PTPN20Q4JDL3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
PTPN20Q4JDL3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 AD001527.2-201ENST00000622994 785 ntBASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN20Q4JDL3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 IGHV3-52-201ENST00000519770 353 ntBASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PTPN20Q4JDL3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 FOSL1P1-201ENST00000511041 816 ntBASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 STK25P1-201ENST00000585406 838 ntBASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN20Q4JDL3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms