Protein–RNA interactions for Protein: Q4G0U5

CFAP221, Cilia- and flagella-associated protein 221, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP221Q4G0U5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CFAP221Q4G0U5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CFAP221Q4G0U5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CFAP221Q4G0U5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CFAP221Q4G0U5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CFAP221Q4G0U5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CFAP221Q4G0U5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CFAP221Q4G0U5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CFAP221Q4G0U5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CFAP221Q4G0U5 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 AP000867.3-201ENST00000524675 377 ntBASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CFAP221Q4G0U5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 AL023806.1-201ENST00000603994 1649 ntBASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 Z69720.1-201ENST00000601483 472 ntBASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CFAP221Q4G0U5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 AD000864.1-201ENST00000624076 2295 ntBASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 AL845331.1-201ENST00000424978 1190 ntBASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CFAP221Q4G0U5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms