Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 KRT16P4-201ENST00000453883 522 ntBASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 AC002558.1-201ENST00000488906 803 ntBASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 AD001527.2-201ENST00000622994 785 ntBASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCSMST1Q4G0I0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCSMST1Q4G0I0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCSMST1Q4G0I0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CCSMST1Q4G0I0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCSMST1Q4G0I0 AC132938.5-201ENST00000624980 1813 ntBASIC17.08■□□□□ 0.33
CCSMST1Q4G0I0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.08■□□□□ 0.33
CCSMST1Q4G0I0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.08■□□□□ 0.33
CCSMST1Q4G0I0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 AL353593.2-201ENST00000602529 1483 ntBASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 AC103564.2-201ENST00000432853 1299 ntBASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 AC091304.2-201ENST00000564639 760 ntBASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 AP001269.4-201ENST00000609611 512 ntBASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 AL121772.3-201ENST00000610840 674 ntBASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCSMST1Q4G0I0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCSMST1Q4G0I0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms