Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.54■□□□□ 0.88
CERKLQ49MI3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.54■□□□□ 0.88
CERKLQ49MI3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CERKLQ49MI3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.53■□□□□ 0.88
CERKLQ49MI3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CERKLQ49MI3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CERKLQ49MI3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CERKLQ49MI3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CERKLQ49MI3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CERKLQ49MI3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
CERKLQ49MI3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CERKLQ49MI3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CERKLQ49MI3 CRYGEP-201ENST00000412192 528 ntBASIC20.53■□□□□ 0.88
CERKLQ49MI3 AC023274.1-201ENST00000418278 595 ntBASIC20.53■□□□□ 0.88
CERKLQ49MI3 LINC00982-205ENST00000420957 435 ntBASIC20.53■□□□□ 0.88
CERKLQ49MI3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CERKLQ49MI3 KRT18P2-201ENST00000447938 1258 ntBASIC20.53■□□□□ 0.88
CERKLQ49MI3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CERKLQ49MI3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.53■□□□□ 0.88
CERKLQ49MI3 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.53■□□□□ 0.88
CERKLQ49MI3 BICD1-207ENST00000551848 1962 ntBASIC20.53■□□□□ 0.88
CERKLQ49MI3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CERKLQ49MI3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CERKLQ49MI3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.53■□□□□ 0.88
CERKLQ49MI3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.53■□□□□ 0.88
CERKLQ49MI3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CERKLQ49MI3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CERKLQ49MI3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.53■□□□□ 0.88
CERKLQ49MI3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CERKLQ49MI3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CERKLQ49MI3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.52■□□□□ 0.88
CERKLQ49MI3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.52■□□□□ 0.88
CERKLQ49MI3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.52■□□□□ 0.88
CERKLQ49MI3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CERKLQ49MI3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CERKLQ49MI3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.52■□□□□ 0.88
CERKLQ49MI3 RPSAP43-201ENST00000402237 625 ntBASIC20.52■□□□□ 0.88
CERKLQ49MI3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.52■□□□□ 0.88
CERKLQ49MI3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.52■□□□□ 0.88
CERKLQ49MI3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.52■□□□□ 0.88
CERKLQ49MI3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.52■□□□□ 0.88
CERKLQ49MI3 AC055717.3-201ENST00000622967 595 ntBASIC20.52■□□□□ 0.88
CERKLQ49MI3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CERKLQ49MI3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CERKLQ49MI3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CERKLQ49MI3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CERKLQ49MI3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.52■□□□□ 0.88
CERKLQ49MI3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CERKLQ49MI3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CERKLQ49MI3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CERKLQ49MI3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.52■□□□□ 0.87
CERKLQ49MI3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CERKLQ49MI3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CERKLQ49MI3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CERKLQ49MI3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CERKLQ49MI3 REXO1L11P-201ENST00000620964 1927 ntBASIC20.51■□□□□ 0.87
CERKLQ49MI3 GPR89P-201ENST00000407924 1495 ntBASIC20.51■□□□□ 0.87
CERKLQ49MI3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CERKLQ49MI3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
CERKLQ49MI3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.51■□□□□ 0.87
CERKLQ49MI3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CERKLQ49MI3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CERKLQ49MI3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CERKLQ49MI3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CERKLQ49MI3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.51■□□□□ 0.87
CERKLQ49MI3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CERKLQ49MI3 AC004832.2-201ENST00000426397 482 ntBASIC20.51■□□□□ 0.87
CERKLQ49MI3 GPX1P2-201ENST00000429271 606 ntBASIC20.51■□□□□ 0.87
CERKLQ49MI3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.51■□□□□ 0.87
CERKLQ49MI3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CERKLQ49MI3 AC002347.1-201ENST00000569543 541 ntBASIC20.51■□□□□ 0.87
CERKLQ49MI3 MIR4751-201ENST00000578027 74 ntBASIC20.51■□□□□ 0.87
CERKLQ49MI3 AL353135.1-201ENST00000606729 504 ntBASIC20.51■□□□□ 0.87
CERKLQ49MI3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.51■□□□□ 0.87
CERKLQ49MI3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.51■□□□□ 0.87
CERKLQ49MI3 AC004790.2-201ENST00000623588 572 ntBASIC20.51■□□□□ 0.87
CERKLQ49MI3 AL805961.1-202ENST00000641562 540 ntBASIC20.51■□□□□ 0.87
CERKLQ49MI3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CERKLQ49MI3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.51■□□□□ 0.87
CERKLQ49MI3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CERKLQ49MI3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CERKLQ49MI3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CERKLQ49MI3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.5■□□□□ 0.87
CERKLQ49MI3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CERKLQ49MI3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CERKLQ49MI3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CERKLQ49MI3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.5■□□□□ 0.87
CERKLQ49MI3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CERKLQ49MI3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CERKLQ49MI3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.5■□□□□ 0.87
CERKLQ49MI3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CERKLQ49MI3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CERKLQ49MI3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.5■□□□□ 0.87
CERKLQ49MI3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CERKLQ49MI3 PTCHD3P3-201ENST00000403073 906 ntBASIC20.5■□□□□ 0.87
CERKLQ49MI3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.5■□□□□ 0.87
CERKLQ49MI3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.5■□□□□ 0.87
CERKLQ49MI3 VN2R19P-201ENST00000442399 1052 ntBASIC20.5■□□□□ 0.87
CERKLQ49MI3 DNAJB3-201ENST00000446806 729 ntBASIC20.5■□□□□ 0.87
CERKLQ49MI3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms