Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 SIGLEC16-201ENST00000599858 1437 ntBASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 LINC01126-201ENST00000623515 1646 ntBASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 AC139713.2-201ENST00000641328 2723 ntBASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTC1Q2NKJ3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 AD001527.2-201ENST00000622994 785 ntBASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 ELL2P1-201ENST00000413990 1906 ntBASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CTC1Q2NKJ3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 AC004817.3-201ENST00000602957 2129 ntBASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CTC1Q2NKJ3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CTC1Q2NKJ3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CTC1Q2NKJ3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CTC1Q2NKJ3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.59
CTC1Q2NKJ3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTC1Q2NKJ3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms