Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDS5AQ29RF7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.02■□□□□ 0.96
PDS5AQ29RF7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.02■□□□□ 0.96
PDS5AQ29RF7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.02■□□□□ 0.96
PDS5AQ29RF7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
PDS5AQ29RF7 AC004832.2-201ENST00000426397 482 ntBASIC21.02■□□□□ 0.95
PDS5AQ29RF7 VN2R19P-201ENST00000442399 1052 ntBASIC21.02■□□□□ 0.95
PDS5AQ29RF7 HCG4B-203ENST00000450128 991 ntBASIC21.02■□□□□ 0.95
PDS5AQ29RF7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PDS5AQ29RF7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.02■□□□□ 0.95
PDS5AQ29RF7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.02■□□□□ 0.95
PDS5AQ29RF7 AC010654.1-201ENST00000615722 808 ntBASIC21.02■□□□□ 0.95
PDS5AQ29RF7 GGTLC5P-201ENST00000617623 998 ntBASIC21.02■□□□□ 0.95
PDS5AQ29RF7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
PDS5AQ29RF7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PDS5AQ29RF7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.02■□□□□ 0.95
PDS5AQ29RF7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.02■□□□□ 0.95
PDS5AQ29RF7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.01■□□□□ 0.95
PDS5AQ29RF7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21■□□□□ 0.95
PDS5AQ29RF7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDS5AQ29RF7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDS5AQ29RF7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDS5AQ29RF7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
PDS5AQ29RF7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PDS5AQ29RF7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21■□□□□ 0.95
PDS5AQ29RF7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
PDS5AQ29RF7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21■□□□□ 0.95
PDS5AQ29RF7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PDS5AQ29RF7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21■□□□□ 0.95
PDS5AQ29RF7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21■□□□□ 0.95
PDS5AQ29RF7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PDS5AQ29RF7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21■□□□□ 0.95
PDS5AQ29RF7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PDS5AQ29RF7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21■□□□□ 0.95
PDS5AQ29RF7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21■□□□□ 0.95
PDS5AQ29RF7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21■□□□□ 0.95
PDS5AQ29RF7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21■□□□□ 0.95
PDS5AQ29RF7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
PDS5AQ29RF7 AC139530.3-201ENST00000620344 690 ntBASIC21■□□□□ 0.95
PDS5AQ29RF7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDS5AQ29RF7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21■□□□□ 0.95
PDS5AQ29RF7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.99■□□□□ 0.95
PDS5AQ29RF7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
PDS5AQ29RF7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 AC133963.1-201ENST00000504166 1679 ntBASIC20.98■□□□□ 0.95
PDS5AQ29RF7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 MRPL20P1-201ENST00000400819 433 ntBASIC20.98■□□□□ 0.95
PDS5AQ29RF7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 CRYGEP-201ENST00000412192 528 ntBASIC20.98■□□□□ 0.95
PDS5AQ29RF7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms