Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC10.77□□□□□ -0.68
HSPG2P98160 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC10.77□□□□□ -0.68
HSPG2P98160 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
HSPG2P98160 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
HSPG2P98160 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.68
HSPG2P98160 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC10.77□□□□□ -0.69
HSPG2P98160 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC10.77□□□□□ -0.69
HSPG2P98160 AC008735.3-201ENST00000596646 500 ntBASIC10.77□□□□□ -0.69
HSPG2P98160 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC10.77□□□□□ -0.69
HSPG2P98160 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC10.77□□□□□ -0.69
HSPG2P98160 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HSPG2P98160 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HSPG2P98160 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HSPG2P98160 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HSPG2P98160 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC10.77□□□□□ -0.69
HSPG2P98160 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HSPG2P98160 AC022210.1-201ENST00000449856 793 ntBASIC10.77□□□□□ -0.69
HSPG2P98160 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
HSPG2P98160 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HSPG2P98160 AC107918.2-201ENST00000530817 355 ntBASIC10.77□□□□□ -0.69
HSPG2P98160 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HSPG2P98160 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
HSPG2P98160 SSH2-210ENST00000582084 560 ntTSL 3 BASIC10.77□□□□□ -0.69
HSPG2P98160 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HSPG2P98160 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC10.77□□□□□ -0.69
HSPG2P98160 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HSPG2P98160 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HSPG2P98160 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC10.77□□□□□ -0.69
HSPG2P98160 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC10.77□□□□□ -0.69
HSPG2P98160 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HSPG2P98160 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
HSPG2P98160 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HSPG2P98160 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
HSPG2P98160 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
HSPG2P98160 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
HSPG2P98160 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
HSPG2P98160 REEP4-207ENST00000523293 913 ntTSL 3 BASIC10.77□□□□□ -0.69
HSPG2P98160 AC092552.1-201ENST00000547243 906 ntBASIC10.77□□□□□ -0.69
HSPG2P98160 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC10.77□□□□□ -0.69
HSPG2P98160 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC10.77□□□□□ -0.69
HSPG2P98160 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HSPG2P98160 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
HSPG2P98160 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HSPG2P98160 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HSPG2P98160 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
HSPG2P98160 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
HSPG2P98160 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC10.76□□□□□ -0.69
HSPG2P98160 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
HSPG2P98160 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
HSPG2P98160 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC10.76□□□□□ -0.69
HSPG2P98160 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
HSPG2P98160 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HSPG2P98160 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
HSPG2P98160 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HSPG2P98160 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HSPG2P98160 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC10.76□□□□□ -0.69
HSPG2P98160 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
HSPG2P98160 HLA-DPB2-205ENST00000435074 1188 ntBASIC10.76□□□□□ -0.69
HSPG2P98160 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HSPG2P98160 AC109462.3-201ENST00000573934 613 ntBASIC10.76□□□□□ -0.69
HSPG2P98160 MIR4453-201ENST00000584019 89 ntBASIC10.76□□□□□ -0.69
HSPG2P98160 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC10.76□□□□□ -0.69
HSPG2P98160 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
HSPG2P98160 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HSPG2P98160 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
HSPG2P98160 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC10.76□□□□□ -0.69
HSPG2P98160 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HSPG2P98160 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HSPG2P98160 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
HSPG2P98160 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC10.76□□□□□ -0.69
HSPG2P98160 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC10.76□□□□□ -0.69
HSPG2P98160 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC10.76□□□□□ -0.69
HSPG2P98160 AC004840.1-201ENST00000636359 365 ntBASIC10.76□□□□□ -0.69
HSPG2P98160 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
HSPG2P98160 EFS-203ENST00000429593 2610 ntTSL 2 BASIC10.76□□□□□ -0.69
HSPG2P98160 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC10.75□□□□□ -0.69
HSPG2P98160 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC10.75□□□□□ -0.69
HSPG2P98160 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC10.75□□□□□ -0.69
HSPG2P98160 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HSPG2P98160 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
HSPG2P98160 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
HSPG2P98160 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC10.75□□□□□ -0.69
HSPG2P98160 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
HSPG2P98160 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC10.75□□□□□ -0.69
HSPG2P98160 COQ4-205ENST00000609948 956 ntTSL 2 BASIC10.75□□□□□ -0.69
HSPG2P98160 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HSPG2P98160 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
HSPG2P98160 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
HSPG2P98160 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
HSPG2P98160 AL590787.1-201ENST00000568856 1315 ntBASIC10.75□□□□□ -0.69
HSPG2P98160 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC10.75□□□□□ -0.69
HSPG2P98160 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HSPG2P98160 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HSPG2P98160 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC10.75□□□□□ -0.69
HSPG2P98160 AC103564.2-201ENST00000432853 1299 ntBASIC10.75□□□□□ -0.69
HSPG2P98160 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC10.75□□□□□ -0.69
HSPG2P98160 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC10.75□□□□□ -0.69
HSPG2P98160 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC10.75□□□□□ -0.69
HSPG2P98160 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC10.75□□□□□ -0.69
HSPG2P98160 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 191.6 ms