Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SKP1P63208 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SKP1P63208 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.75■□□□□ 0.27
SKP1P63208 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SKP1P63208 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SKP1P63208 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SKP1P63208 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SKP1P63208 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.75■□□□□ 0.27
SKP1P63208 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.75■□□□□ 0.27
SKP1P63208 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SKP1P63208 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.74■□□□□ 0.27
SKP1P63208 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SKP1P63208 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SKP1P63208 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SKP1P63208 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SKP1P63208 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.74■□□□□ 0.27
SKP1P63208 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
SKP1P63208 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SKP1P63208 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SKP1P63208 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SKP1P63208 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.74■□□□□ 0.27
SKP1P63208 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SKP1P63208 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SKP1P63208 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SKP1P63208 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SKP1P63208 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.74■□□□□ 0.27
SKP1P63208 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.74■□□□□ 0.27
SKP1P63208 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SKP1P63208 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.74■□□□□ 0.27
SKP1P63208 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.74■□□□□ 0.27
SKP1P63208 AL450487.1-201ENST00000426799 995 ntBASIC16.74■□□□□ 0.27
SKP1P63208 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.74■□□□□ 0.27
SKP1P63208 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.74■□□□□ 0.27
SKP1P63208 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.74■□□□□ 0.27
SKP1P63208 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SKP1P63208 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.74■□□□□ 0.27
SKP1P63208 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.74■□□□□ 0.27
SKP1P63208 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SKP1P63208 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SKP1P63208 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SKP1P63208 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.74■□□□□ 0.27
SKP1P63208 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.74■□□□□ 0.27
SKP1P63208 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.74■□□□□ 0.27
SKP1P63208 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.74■□□□□ 0.27
SKP1P63208 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.74■□□□□ 0.27
SKP1P63208 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SKP1P63208 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SKP1P63208 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.73■□□□□ 0.27
SKP1P63208 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SKP1P63208 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SKP1P63208 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SKP1P63208 AC007613.1-201ENST00000572811 2597 ntBASIC16.73■□□□□ 0.27
SKP1P63208 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SKP1P63208 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SKP1P63208 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SKP1P63208 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SKP1P63208 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.73■□□□□ 0.27
SKP1P63208 RBM17P3-201ENST00000417687 1192 ntBASIC16.73■□□□□ 0.27
SKP1P63208 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.73■□□□□ 0.27
SKP1P63208 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.73■□□□□ 0.27
SKP1P63208 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.73■□□□□ 0.27
SKP1P63208 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.73■□□□□ 0.27
SKP1P63208 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.73■□□□□ 0.27
SKP1P63208 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.73■□□□□ 0.27
SKP1P63208 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.73■□□□□ 0.27
SKP1P63208 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.73■□□□□ 0.27
SKP1P63208 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SKP1P63208 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SKP1P63208 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SKP1P63208 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SKP1P63208 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SKP1P63208 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SKP1P63208 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SKP1P63208 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SKP1P63208 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SKP1P63208 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.72■□□□□ 0.27
SKP1P63208 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SKP1P63208 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SKP1P63208 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.72■□□□□ 0.27
SKP1P63208 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SKP1P63208 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SKP1P63208 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SKP1P63208 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SKP1P63208 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.72■□□□□ 0.27
SKP1P63208 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.72■□□□□ 0.27
SKP1P63208 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SKP1P63208 DUSP5P1-201ENST00000441325 1139 ntBASIC16.72■□□□□ 0.27
SKP1P63208 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.72■□□□□ 0.27
SKP1P63208 KRT126P-201ENST00000549467 1181 ntBASIC16.72■□□□□ 0.27
SKP1P63208 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SKP1P63208 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.72■□□□□ 0.27
SKP1P63208 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.72■□□□□ 0.27
SKP1P63208 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.72■□□□□ 0.27
SKP1P63208 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SKP1P63208 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SKP1P63208 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.72■□□□□ 0.27
SKP1P63208 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
SKP1P63208 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SKP1P63208 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SKP1P63208 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms