Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S1P61966 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
AP1S1P61966 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.72■□□□□ 0.43
AP1S1P61966 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S1P61966 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S1P61966 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
AP1S1P61966 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.72■□□□□ 0.43
AP1S1P61966 SPDYE21P-201ENST00000413323 827 ntBASIC17.72■□□□□ 0.43
AP1S1P61966 FGFR3P6-201ENST00000457012 610 ntBASIC17.72■□□□□ 0.43
AP1S1P61966 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.72■□□□□ 0.43
AP1S1P61966 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.72■□□□□ 0.43
AP1S1P61966 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.72■□□□□ 0.43
AP1S1P61966 AL139327.4-201ENST00000612362 153 ntBASIC17.72■□□□□ 0.43
AP1S1P61966 AL139288.1-201ENST00000623748 933 ntBASIC17.72■□□□□ 0.43
AP1S1P61966 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S1P61966 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S1P61966 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
AP1S1P61966 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S1P61966 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.72■□□□□ 0.43
AP1S1P61966 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S1P61966 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S1P61966 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S1P61966 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S1P61966 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S1P61966 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
AP1S1P61966 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S1P61966 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.72■□□□□ 0.43
AP1S1P61966 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
AP1S1P61966 AC079776.2-201ENST00000641154 1609 ntBASIC17.72■□□□□ 0.43
AP1S1P61966 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S1P61966 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP1S1P61966 SIGLEC16-201ENST00000599858 1437 ntBASIC17.72■□□□□ 0.43
AP1S1P61966 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
AP1S1P61966 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.71■□□□□ 0.43
AP1S1P61966 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
AP1S1P61966 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
AP1S1P61966 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.71■□□□□ 0.43
AP1S1P61966 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
AP1S1P61966 SCARNA2-201ENST00000458748 420 ntBASIC17.71■□□□□ 0.43
AP1S1P61966 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 AL121912.1-201ENST00000603683 238 ntBASIC17.71■□□□□ 0.43
AP1S1P61966 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
AP1S1P61966 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP1S1P61966 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
AP1S1P61966 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
AP1S1P61966 AL356309.3-201ENST00000624132 1934 ntBASIC17.7■□□□□ 0.42
AP1S1P61966 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP1S1P61966 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP1S1P61966 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP1S1P61966 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP1S1P61966 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP1S1P61966 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.7■□□□□ 0.42
AP1S1P61966 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
AP1S1P61966 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
AP1S1P61966 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.7■□□□□ 0.42
AP1S1P61966 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
AP1S1P61966 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP1S1P61966 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP1S1P61966 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.7■□□□□ 0.42
AP1S1P61966 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.7■□□□□ 0.42
AP1S1P61966 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP1S1P61966 AL020989.1-201ENST00000422979 469 ntBASIC17.7■□□□□ 0.42
AP1S1P61966 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.7■□□□□ 0.42
AP1S1P61966 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.7■□□□□ 0.42
AP1S1P61966 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP1S1P61966 STK19B-204ENST00000512515 211 ntBASIC17.7■□□□□ 0.42
AP1S1P61966 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.7■□□□□ 0.42
AP1S1P61966 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
AP1S1P61966 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.7■□□□□ 0.42
AP1S1P61966 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.7■□□□□ 0.42
AP1S1P61966 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP1S1P61966 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP1S1P61966 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
AP1S1P61966 AC009336.1-201ENST00000608941 1553 ntBASIC17.7■□□□□ 0.42
AP1S1P61966 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP1S1P61966 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
AP1S1P61966 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms