Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VBP1P61758 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VBP1P61758 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.83■□□□□ 0.12
VBP1P61758 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VBP1P61758 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VBP1P61758 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
VBP1P61758 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
VBP1P61758 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
VBP1P61758 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VBP1P61758 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VBP1P61758 AC078925.2-201ENST00000624013 1973 ntBASIC15.82■□□□□ 0.12
VBP1P61758 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VBP1P61758 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VBP1P61758 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.82■□□□□ 0.12
VBP1P61758 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
VBP1P61758 AC024909.3-201ENST00000611513 2257 ntBASIC15.82■□□□□ 0.12
VBP1P61758 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
VBP1P61758 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
VBP1P61758 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
VBP1P61758 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
VBP1P61758 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
VBP1P61758 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VBP1P61758 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VBP1P61758 AC091874.3-201ENST00000512672 1195 ntBASIC15.82■□□□□ 0.12
VBP1P61758 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.82■□□□□ 0.12
VBP1P61758 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.82■□□□□ 0.12
VBP1P61758 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.82■□□□□ 0.12
VBP1P61758 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
VBP1P61758 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.82■□□□□ 0.12
VBP1P61758 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VBP1P61758 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.82■□□□□ 0.12
VBP1P61758 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
VBP1P61758 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VBP1P61758 GPAT2P1-201ENST00000444924 1672 ntBASIC15.82■□□□□ 0.12
VBP1P61758 AC132938.6-201ENST00000623828 1655 ntBASIC15.82■□□□□ 0.12
VBP1P61758 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
VBP1P61758 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.82■□□□□ 0.12
VBP1P61758 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
VBP1P61758 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
VBP1P61758 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
VBP1P61758 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
VBP1P61758 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VBP1P61758 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VBP1P61758 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VBP1P61758 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VBP1P61758 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.82■□□□□ 0.12
VBP1P61758 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
VBP1P61758 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VBP1P61758 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
VBP1P61758 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VBP1P61758 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.81■□□□□ 0.12
VBP1P61758 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.81■□□□□ 0.12
VBP1P61758 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
VBP1P61758 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.81■□□□□ 0.12
VBP1P61758 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 PRKY-204ENST00000533551 1019 ntBASIC15.81■□□□□ 0.12
VBP1P61758 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.81■□□□□ 0.12
VBP1P61758 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
VBP1P61758 SOX15-203ENST00000570788 1093 ntBASIC15.81■□□□□ 0.12
VBP1P61758 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.81■□□□□ 0.12
VBP1P61758 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
VBP1P61758 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.81■□□□□ 0.12
VBP1P61758 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.81■□□□□ 0.12
VBP1P61758 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VBP1P61758 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VBP1P61758 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VBP1P61758 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
VBP1P61758 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.8■□□□□ 0.12
VBP1P61758 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VBP1P61758 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VBP1P61758 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
VBP1P61758 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
VBP1P61758 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.8■□□□□ 0.12
VBP1P61758 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VBP1P61758 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VBP1P61758 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VBP1P61758 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.8■□□□□ 0.12
VBP1P61758 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VBP1P61758 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
VBP1P61758 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.8■□□□□ 0.12
VBP1P61758 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms