Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
CDH13P55290 AC073912.3-201ENST00000624414 853 ntBASIC17.25■□□□□ 0.35
CDH13P55290 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.25■□□□□ 0.35
CDH13P55290 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH13P55290 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.25■□□□□ 0.35
CDH13P55290 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CDH13P55290 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH13P55290 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH13P55290 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CDH13P55290 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH13P55290 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH13P55290 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH13P55290 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CDH13P55290 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDH13P55290 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH13P55290 LYSMD4-203ENST00000378904 2122 ntBASIC17.24■□□□□ 0.35
CDH13P55290 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDH13P55290 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CDH13P55290 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.24■□□□□ 0.35
CDH13P55290 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH13P55290 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH13P55290 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDH13P55290 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.24■□□□□ 0.35
CDH13P55290 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CDH13P55290 MIR662-201ENST00000384847 95 ntBASIC17.24■□□□□ 0.35
CDH13P55290 KRT18P57-201ENST00000443599 1254 ntBASIC17.24■□□□□ 0.35
CDH13P55290 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH13P55290 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.24■□□□□ 0.35
CDH13P55290 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.24■□□□□ 0.35
CDH13P55290 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDH13P55290 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.24■□□□□ 0.35
CDH13P55290 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.24■□□□□ 0.35
CDH13P55290 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH13P55290 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH13P55290 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH13P55290 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDH13P55290 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH13P55290 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH13P55290 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH13P55290 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH13P55290 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH13P55290 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH13P55290 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.24■□□□□ 0.35
CDH13P55290 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH13P55290 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH13P55290 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH13P55290 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH13P55290 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CDH13P55290 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CDH13P55290 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CDH13P55290 BX276092.7-203ENST00000637198 1536 ntBASIC17.23■□□□□ 0.35
CDH13P55290 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 HBZP1-201ENST00000354915 429 ntBASIC17.23■□□□□ 0.35
CDH13P55290 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CDH13P55290 TSPY5P-201ENST00000426936 936 ntBASIC17.23■□□□□ 0.35
CDH13P55290 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.23■□□□□ 0.35
CDH13P55290 MTCL1P1-201ENST00000446207 792 ntBASIC17.23■□□□□ 0.35
CDH13P55290 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.23■□□□□ 0.35
CDH13P55290 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.23■□□□□ 0.35
CDH13P55290 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.23■□□□□ 0.35
CDH13P55290 AL359075.1-203ENST00000462729 1002 ntBASIC17.23■□□□□ 0.35
CDH13P55290 AC068472.1-201ENST00000474589 881 ntBASIC17.23■□□□□ 0.35
CDH13P55290 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.23■□□□□ 0.35
CDH13P55290 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.23■□□□□ 0.35
CDH13P55290 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.23■□□□□ 0.35
CDH13P55290 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.23■□□□□ 0.35
CDH13P55290 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CDH13P55290 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
CDH13P55290 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CDH13P55290 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH13P55290 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CDH13P55290 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.23■□□□□ 0.35
CDH13P55290 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CDH13P55290 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH13P55290 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH13P55290 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH13P55290 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH13P55290 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH13P55290 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH13P55290 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH13P55290 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH13P55290 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms