Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC145285.3-201ENST00000564603 959 ntBASIC18.87■□□□□ 0.61
VCPP55072 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
VCPP55072 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VCPP55072 FAM197Y3-203ENST00000618346 717 ntBASIC18.87■□□□□ 0.61
VCPP55072 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
VCPP55072 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCPP55072 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VCPP55072 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
VCPP55072 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.87■□□□□ 0.61
VCPP55072 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCPP55072 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
VCPP55072 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
VCPP55072 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.86■□□□□ 0.61
VCPP55072 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCPP55072 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCPP55072 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.86■□□□□ 0.61
VCPP55072 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
VCPP55072 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.86■□□□□ 0.61
VCPP55072 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
VCPP55072 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCPP55072 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCPP55072 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
VCPP55072 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCPP55072 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCPP55072 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCPP55072 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.86■□□□□ 0.61
VCPP55072 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.86■□□□□ 0.61
VCPP55072 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.86■□□□□ 0.61
VCPP55072 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.86■□□□□ 0.61
VCPP55072 SART3-203ENST00000546611 1184 ntBASIC18.86■□□□□ 0.61
VCPP55072 MIR3687-2-201ENST00000577708 61 ntBASIC18.86■□□□□ 0.61
VCPP55072 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VCPP55072 MIR3687-1-201ENST00000614492 61 ntBASIC18.86■□□□□ 0.61
VCPP55072 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.86■□□□□ 0.61
VCPP55072 AL355877.3-201ENST00000622820 899 ntBASIC18.86■□□□□ 0.61
VCPP55072 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCPP55072 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
VCPP55072 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VCPP55072 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCPP55072 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCPP55072 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VCPP55072 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCPP55072 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCPP55072 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VCPP55072 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.85■□□□□ 0.61
VCPP55072 AC093010.1-201ENST00000473625 1624 ntBASIC18.85■□□□□ 0.61
VCPP55072 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
VCPP55072 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
VCPP55072 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.85■□□□□ 0.61
VCPP55072 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
VCPP55072 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.85■□□□□ 0.61
VCPP55072 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
VCPP55072 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
VCPP55072 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.85■□□□□ 0.61
VCPP55072 AC132008.2-207ENST00000454517 770 ntBASIC18.85■□□□□ 0.61
VCPP55072 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.85■□□□□ 0.61
VCPP55072 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.85■□□□□ 0.61
VCPP55072 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.85■□□□□ 0.61
VCPP55072 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.85■□□□□ 0.61
VCPP55072 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.85■□□□□ 0.61
VCPP55072 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.85■□□□□ 0.61
VCPP55072 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
VCPP55072 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VCPP55072 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
VCPP55072 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.85■□□□□ 0.61
VCPP55072 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
VCPP55072 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VCPP55072 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VCPP55072 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
VCPP55072 LTB4R2-202ENST00000528054 3092 ntBASIC18.85■□□□□ 0.61
VCPP55072 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VCPP55072 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCPP55072 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCPP55072 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.84■□□□□ 0.61
VCPP55072 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCPP55072 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCPP55072 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCPP55072 AL353692.3-201ENST00000407031 1396 ntBASIC18.84■□□□□ 0.61
VCPP55072 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
VCPP55072 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCPP55072 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms