Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDE1AP54750 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE1AP54750 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.49■■□□□ 1.03
PDE1AP54750 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PDE1AP54750 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE1AP54750 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDE1AP54750 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE1AP54750 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE1AP54750 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PDE1AP54750 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
PDE1AP54750 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE1AP54750 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE1AP54750 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PDE1AP54750 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.48■■□□□ 1.03
PDE1AP54750 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDE1AP54750 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE1AP54750 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PDE1AP54750 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE1AP54750 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.48■■□□□ 1.03
PDE1AP54750 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE1AP54750 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDE1AP54750 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.48■■□□□ 1.03
PDE1AP54750 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.48■■□□□ 1.03
PDE1AP54750 IGHV3-52-201ENST00000519770 353 ntBASIC21.48■■□□□ 1.03
PDE1AP54750 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDE1AP54750 AD001527.2-201ENST00000622994 785 ntBASIC21.48■■□□□ 1.03
PDE1AP54750 AC093458.2-201ENST00000623150 629 ntBASIC21.48■■□□□ 1.03
PDE1AP54750 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE1AP54750 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.48■■□□□ 1.03
PDE1AP54750 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE1AP54750 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PDE1AP54750 AC020916.1-201ENST00000587762 1774 ntBASIC21.48■■□□□ 1.03
PDE1AP54750 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE1AP54750 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
PDE1AP54750 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE1AP54750 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE1AP54750 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.48■■□□□ 1.03
PDE1AP54750 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDE1AP54750 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.48■■□□□ 1.03
PDE1AP54750 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDE1AP54750 AC016396.2-201ENST00000562575 1417 ntBASIC21.47■■□□□ 1.03
PDE1AP54750 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDE1AP54750 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDE1AP54750 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDE1AP54750 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
PDE1AP54750 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDE1AP54750 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDE1AP54750 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDE1AP54750 MYCLP1-201ENST00000372451 1075 ntBASIC21.47■■□□□ 1.03
PDE1AP54750 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.47■■□□□ 1.03
PDE1AP54750 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.47■■□□□ 1.03
PDE1AP54750 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.47■■□□□ 1.03
PDE1AP54750 AC096582.2-201ENST00000510860 516 ntBASIC21.47■■□□□ 1.03
PDE1AP54750 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDE1AP54750 AC012615.1-201ENST00000565797 1299 ntBASIC21.47■■□□□ 1.03
PDE1AP54750 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.47■■□□□ 1.03
PDE1AP54750 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PDE1AP54750 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDE1AP54750 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.47■■□□□ 1.03
PDE1AP54750 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PDE1AP54750 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDE1AP54750 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDE1AP54750 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PDE1AP54750 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE1AP54750 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE1AP54750 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PDE1AP54750 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE1AP54750 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE1AP54750 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
PDE1AP54750 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDE1AP54750 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE1AP54750 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE1AP54750 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
PDE1AP54750 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE1AP54750 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDE1AP54750 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.46■■□□□ 1.03
PDE1AP54750 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.46■■□□□ 1.03
PDE1AP54750 STK25P1-201ENST00000585406 838 ntBASIC21.46■■□□□ 1.03
PDE1AP54750 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.46■■□□□ 1.03
PDE1AP54750 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE1AP54750 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE1AP54750 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
PDE1AP54750 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE1AP54750 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE1AP54750 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.46■■□□□ 1.03
PDE1AP54750 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDE1AP54750 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE1AP54750 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.46■■□□□ 1.03
PDE1AP54750 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE1AP54750 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.46■■□□□ 1.03
PDE1AP54750 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC21.46■■□□□ 1.03
PDE1AP54750 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.45■■□□□ 1.03
PDE1AP54750 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
PDE1AP54750 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDE1AP54750 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDE1AP54750 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDE1AP54750 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDE1AP54750 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
PDE1AP54750 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.45■■□□□ 1.02
PDE1AP54750 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms