Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IDH3AP50213 AP003071.4-201ENST00000562276 1284 ntBASIC17.14■□□□□ 0.33
IDH3AP50213 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.14■□□□□ 0.33
IDH3AP50213 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.14■□□□□ 0.33
IDH3AP50213 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.14■□□□□ 0.33
IDH3AP50213 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IDH3AP50213 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
IDH3AP50213 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.14■□□□□ 0.33
IDH3AP50213 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IDH3AP50213 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
IDH3AP50213 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.14■□□□□ 0.33
IDH3AP50213 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IDH3AP50213 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.14■□□□□ 0.33
IDH3AP50213 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
IDH3AP50213 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
IDH3AP50213 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IDH3AP50213 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.14■□□□□ 0.33
IDH3AP50213 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IDH3AP50213 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.14■□□□□ 0.33
IDH3AP50213 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.14■□□□□ 0.33
IDH3AP50213 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IDH3AP50213 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
IDH3AP50213 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.13■□□□□ 0.33
IDH3AP50213 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.13■□□□□ 0.33
IDH3AP50213 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.13■□□□□ 0.33
IDH3AP50213 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
IDH3AP50213 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
IDH3AP50213 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
IDH3AP50213 BX276092.7-203ENST00000637198 1536 ntBASIC17.13■□□□□ 0.33
IDH3AP50213 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.13■□□□□ 0.33
IDH3AP50213 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 UNC93B2-201ENST00000285383 730 ntBASIC17.13■□□□□ 0.33
IDH3AP50213 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 AC009947.2-201ENST00000444014 672 ntBASIC17.13■□□□□ 0.33
IDH3AP50213 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.13■□□□□ 0.33
IDH3AP50213 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.13■□□□□ 0.33
IDH3AP50213 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
IDH3AP50213 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.13■□□□□ 0.33
IDH3AP50213 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.13■□□□□ 0.33
IDH3AP50213 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.13■□□□□ 0.33
IDH3AP50213 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.13■□□□□ 0.33
IDH3AP50213 AC010653.2-201ENST00000623505 997 ntBASIC17.13■□□□□ 0.33
IDH3AP50213 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.13■□□□□ 0.33
IDH3AP50213 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.13■□□□□ 0.33
IDH3AP50213 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.13■□□□□ 0.33
IDH3AP50213 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
IDH3AP50213 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
IDH3AP50213 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3AP50213 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
IDH3AP50213 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
IDH3AP50213 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
IDH3AP50213 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.12■□□□□ 0.33
IDH3AP50213 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3AP50213 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.12■□□□□ 0.33
IDH3AP50213 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.12■□□□□ 0.33
IDH3AP50213 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.12■□□□□ 0.33
IDH3AP50213 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
IDH3AP50213 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
IDH3AP50213 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
IDH3AP50213 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.12■□□□□ 0.33
IDH3AP50213 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.12■□□□□ 0.33
IDH3AP50213 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.12■□□□□ 0.33
IDH3AP50213 AC092865.7-201ENST00000641832 219 ntBASIC17.12■□□□□ 0.33
IDH3AP50213 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3AP50213 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.12■□□□□ 0.33
IDH3AP50213 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3AP50213 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3AP50213 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3AP50213 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.12■□□□□ 0.33
IDH3AP50213 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.12■□□□□ 0.33
IDH3AP50213 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.12■□□□□ 0.33
IDH3AP50213 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3AP50213 AC092053.1-201ENST00000605787 1936 ntBASIC17.11■□□□□ 0.33
IDH3AP50213 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3AP50213 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3AP50213 RNF216P1-203ENST00000404404 2427 ntBASIC17.11■□□□□ 0.33
IDH3AP50213 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.11■□□□□ 0.33
IDH3AP50213 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3AP50213 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.11■□□□□ 0.33
IDH3AP50213 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3AP50213 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.11■□□□□ 0.33
IDH3AP50213 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.11■□□□□ 0.33
IDH3AP50213 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms