Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.63■□□□□ 0.57
LHX1P48742 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX1P48742 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.63■□□□□ 0.57
LHX1P48742 LAGE3P1-201ENST00000425356 484 ntBASIC18.63■□□□□ 0.57
LHX1P48742 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LHX1P48742 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.63■□□□□ 0.57
LHX1P48742 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LHX1P48742 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.63■□□□□ 0.57
LHX1P48742 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
LHX1P48742 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
LHX1P48742 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LHX1P48742 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LHX1P48742 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.63■□□□□ 0.57
LHX1P48742 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LHX1P48742 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX1P48742 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LHX1P48742 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LHX1P48742 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LHX1P48742 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX1P48742 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.63■□□□□ 0.57
LHX1P48742 HLA-J-201ENST00000462773 1622 ntBASIC18.63■□□□□ 0.57
LHX1P48742 AC148477.5-201ENST00000625164 1645 ntBASIC18.63■□□□□ 0.57
LHX1P48742 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX1P48742 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LHX1P48742 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.63■□□□□ 0.57
LHX1P48742 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.62■□□□□ 0.57
LHX1P48742 AC008764.6-201ENST00000595909 2069 ntBASIC18.62■□□□□ 0.57
LHX1P48742 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX1P48742 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LHX1P48742 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.62■□□□□ 0.57
LHX1P48742 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.62■□□□□ 0.57
LHX1P48742 AC139887.3-201ENST00000568585 713 ntBASIC18.62■□□□□ 0.57
LHX1P48742 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.62■□□□□ 0.57
LHX1P48742 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.62■□□□□ 0.57
LHX1P48742 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.62■□□□□ 0.57
LHX1P48742 BX640515.1-201ENST00000617215 977 ntBASIC18.62■□□□□ 0.57
LHX1P48742 AL589182.2-201ENST00000619332 1049 ntBASIC18.62■□□□□ 0.57
LHX1P48742 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LHX1P48742 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX1P48742 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX1P48742 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LHX1P48742 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LHX1P48742 LINC00304-203ENST00000565008 1864 ntBASIC18.62■□□□□ 0.57
LHX1P48742 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX1P48742 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX1P48742 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX1P48742 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX1P48742 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX1P48742 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LHX1P48742 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX1P48742 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX1P48742 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LHX1P48742 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX1P48742 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX1P48742 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX1P48742 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX1P48742 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LHX1P48742 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
LHX1P48742 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.61■□□□□ 0.57
LHX1P48742 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX1P48742 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LHX1P48742 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX1P48742 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LHX1P48742 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.61■□□□□ 0.57
LHX1P48742 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.61■□□□□ 0.57
LHX1P48742 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.61■□□□□ 0.57
LHX1P48742 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LHX1P48742 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.61■□□□□ 0.57
LHX1P48742 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.61■□□□□ 0.57
LHX1P48742 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LHX1P48742 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.61■□□□□ 0.57
LHX1P48742 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX1P48742 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX1P48742 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.61■□□□□ 0.57
LHX1P48742 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.61■□□□□ 0.57
LHX1P48742 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.61■□□□□ 0.57
LHX1P48742 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.61■□□□□ 0.57
LHX1P48742 MIR7706-201ENST00000613747 67 ntBASIC18.61■□□□□ 0.57
LHX1P48742 AC008735.5-201ENST00000623544 497 ntBASIC18.61■□□□□ 0.57
LHX1P48742 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX1P48742 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LHX1P48742 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX1P48742 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX1P48742 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX1P48742 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX1P48742 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
LHX1P48742 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.61■□□□□ 0.57
LHX1P48742 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LHX1P48742 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
LHX1P48742 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.6■□□□□ 0.57
LHX1P48742 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.6■□□□□ 0.57
LHX1P48742 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.6■□□□□ 0.57
LHX1P48742 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX1P48742 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.6■□□□□ 0.57
LHX1P48742 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX1P48742 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX1P48742 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.6■□□□□ 0.57
LHX1P48742 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX1P48742 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX1P48742 AL590627.1-203ENST00000421194 1026 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms