Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.9■□□□□ 0.78
TM4SF4P48230 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.9■□□□□ 0.78
TM4SF4P48230 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.9■□□□□ 0.78
TM4SF4P48230 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.9■□□□□ 0.78
TM4SF4P48230 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.9■□□□□ 0.78
TM4SF4P48230 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF4P48230 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TM4SF4P48230 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF4P48230 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.9■□□□□ 0.78
TM4SF4P48230 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF4P48230 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.9■□□□□ 0.78
TM4SF4P48230 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF4P48230 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF4P48230 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM4SF4P48230 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TM4SF4P48230 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF4P48230 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF4P48230 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF4P48230 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF4P48230 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF4P48230 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF4P48230 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.89■□□□□ 0.77
TM4SF4P48230 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
TM4SF4P48230 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TM4SF4P48230 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.89■□□□□ 0.77
TM4SF4P48230 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.89■□□□□ 0.77
TM4SF4P48230 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF4P48230 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
TM4SF4P48230 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF4P48230 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.89■□□□□ 0.77
TM4SF4P48230 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.89■□□□□ 0.77
TM4SF4P48230 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF4P48230 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.89■□□□□ 0.77
TM4SF4P48230 AC005332.7-201ENST00000614046 2005 ntBASIC19.89■□□□□ 0.77
TM4SF4P48230 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF4P48230 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF4P48230 CU639417.3-201ENST00000624240 1404 ntBASIC19.89■□□□□ 0.77
TM4SF4P48230 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TM4SF4P48230 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TM4SF4P48230 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
TM4SF4P48230 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.88■□□□□ 0.77
TM4SF4P48230 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF4P48230 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
TM4SF4P48230 AC009949.1-201ENST00000623048 1830 ntBASIC19.88■□□□□ 0.77
TM4SF4P48230 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.88■□□□□ 0.77
TM4SF4P48230 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TM4SF4P48230 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF4P48230 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TM4SF4P48230 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF4P48230 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.88■□□□□ 0.77
TM4SF4P48230 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.88■□□□□ 0.77
TM4SF4P48230 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.88■□□□□ 0.77
TM4SF4P48230 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.88■□□□□ 0.77
TM4SF4P48230 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.88■□□□□ 0.77
TM4SF4P48230 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF4P48230 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.88■□□□□ 0.77
TM4SF4P48230 MIR6799-201ENST00000620297 69 ntBASIC19.88■□□□□ 0.77
TM4SF4P48230 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TM4SF4P48230 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF4P48230 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF4P48230 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.88■□□□□ 0.77
TM4SF4P48230 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.88■□□□□ 0.77
TM4SF4P48230 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.88■□□□□ 0.77
TM4SF4P48230 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF4P48230 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF4P48230 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TM4SF4P48230 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
TM4SF4P48230 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.87■□□□□ 0.77
TM4SF4P48230 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF4P48230 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF4P48230 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF4P48230 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF4P48230 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF4P48230 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF4P48230 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF4P48230 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF4P48230 AC107918.2-201ENST00000530817 355 ntBASIC19.87■□□□□ 0.77
TM4SF4P48230 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF4P48230 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.87■□□□□ 0.77
TM4SF4P48230 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
TM4SF4P48230 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
TM4SF4P48230 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF4P48230 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.87■□□□□ 0.77
TM4SF4P48230 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF4P48230 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TM4SF4P48230 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF4P48230 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF4P48230 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF4P48230 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF4P48230 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF4P48230 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF4P48230 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF4P48230 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF4P48230 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TM4SF4P48230 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.86■□□□□ 0.77
TM4SF4P48230 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.86■□□□□ 0.77
TM4SF4P48230 U91328.1-201ENST00000437528 223 ntBASIC19.86■□□□□ 0.77
TM4SF4P48230 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF4P48230 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.86■□□□□ 0.77
TM4SF4P48230 ALG1L8P-201ENST00000533887 760 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms