Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP13P45452 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
MMP13P45452 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
MMP13P45452 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.34■□□□□ 0.53
MMP13P45452 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
MMP13P45452 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
MMP13P45452 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.34■□□□□ 0.53
MMP13P45452 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP13P45452 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP13P45452 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.34■□□□□ 0.53
MMP13P45452 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP13P45452 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP13P45452 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MMP13P45452 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.33■□□□□ 0.53
MMP13P45452 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.33■□□□□ 0.53
MMP13P45452 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP13P45452 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
MMP13P45452 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
MMP13P45452 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
MMP13P45452 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP13P45452 AC022898.2-201ENST00000616822 1312 ntBASIC18.33■□□□□ 0.53
MMP13P45452 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP13P45452 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MMP13P45452 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MMP13P45452 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.33■□□□□ 0.52
MMP13P45452 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
MMP13P45452 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP13P45452 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.33■□□□□ 0.52
MMP13P45452 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.33■□□□□ 0.52
MMP13P45452 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP13P45452 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP13P45452 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MMP13P45452 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP13P45452 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP13P45452 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP13P45452 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
MMP13P45452 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.33■□□□□ 0.52
MMP13P45452 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP13P45452 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP13P45452 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
MMP13P45452 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP13P45452 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
MMP13P45452 CROCCP2-202ENST00000412962 2773 ntBASIC18.32■□□□□ 0.52
MMP13P45452 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP13P45452 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
MMP13P45452 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP13P45452 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP13P45452 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP13P45452 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP13P45452 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.32■□□□□ 0.52
MMP13P45452 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP13P45452 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP13P45452 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
MMP13P45452 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP13P45452 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP13P45452 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.32■□□□□ 0.52
MMP13P45452 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.32■□□□□ 0.52
MMP13P45452 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.32■□□□□ 0.52
MMP13P45452 AL358472.4-201ENST00000633140 710 ntBASIC18.32■□□□□ 0.52
MMP13P45452 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.32■□□□□ 0.52
MMP13P45452 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP13P45452 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP13P45452 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP13P45452 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
MMP13P45452 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP13P45452 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP13P45452 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP13P45452 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP13P45452 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
MMP13P45452 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP13P45452 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.32■□□□□ 0.52
MMP13P45452 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.32■□□□□ 0.52
MMP13P45452 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP13P45452 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP13P45452 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.31■□□□□ 0.52
MMP13P45452 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MMP13P45452 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MMP13P45452 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.31■□□□□ 0.52
MMP13P45452 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MMP13P45452 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MMP13P45452 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.31■□□□□ 0.52
MMP13P45452 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP13P45452 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP13P45452 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP13P45452 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
MMP13P45452 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP13P45452 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP13P45452 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP13P45452 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP13P45452 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.31■□□□□ 0.52
MMP13P45452 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP13P45452 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
MMP13P45452 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.31■□□□□ 0.52
MMP13P45452 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.31■□□□□ 0.52
MMP13P45452 KRT8P26-201ENST00000534154 1276 ntBASIC18.31■□□□□ 0.52
MMP13P45452 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.31■□□□□ 0.52
MMP13P45452 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.31■□□□□ 0.52
MMP13P45452 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.31■□□□□ 0.52
MMP13P45452 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MMP13P45452 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms