Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.45□□□□□ -0.1
NKX2-1P43699 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX2-1P43699 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX2-1P43699 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.45□□□□□ -0.1
NKX2-1P43699 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.45□□□□□ -0.1
NKX2-1P43699 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX2-1P43699 SLC25A1P4-201ENST00000567977 778 ntBASIC14.45□□□□□ -0.1
NKX2-1P43699 MIR4674-201ENST00000582457 87 ntBASIC14.45□□□□□ -0.1
NKX2-1P43699 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.45□□□□□ -0.1
NKX2-1P43699 AC006058.3-201ENST00000606217 1069 ntBASIC14.45□□□□□ -0.1
NKX2-1P43699 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-1P43699 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-1P43699 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-1P43699 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-1P43699 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
NKX2-1P43699 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-1P43699 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NKX2-1P43699 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-1P43699 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NKX2-1P43699 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX2-1P43699 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-1P43699 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.45□□□□□ -0.1
NKX2-1P43699 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.45□□□□□ -0.1
NKX2-1P43699 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NKX2-1P43699 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
NKX2-1P43699 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX2-1P43699 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.44□□□□□ -0.1
NKX2-1P43699 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX2-1P43699 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NKX2-1P43699 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 AC009949.1-201ENST00000623048 1830 ntBASIC14.44□□□□□ -0.1
NKX2-1P43699 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
NKX2-1P43699 MESTP1-201ENST00000404287 994 ntBASIC14.44□□□□□ -0.1
NKX2-1P43699 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX2-1P43699 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.44□□□□□ -0.1
NKX2-1P43699 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.44□□□□□ -0.1
NKX2-1P43699 RN7SL471P-201ENST00000580476 299 ntBASIC14.44□□□□□ -0.1
NKX2-1P43699 AF186192.3-201ENST00000583427 947 ntBASIC14.44□□□□□ -0.1
NKX2-1P43699 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.44□□□□□ -0.1
NKX2-1P43699 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NKX2-1P43699 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX2-1P43699 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.44□□□□□ -0.1
NKX2-1P43699 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NKX2-1P43699 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
NKX2-1P43699 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.44□□□□□ -0.1
NKX2-1P43699 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-1P43699 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.43□□□□□ -0.1
NKX2-1P43699 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX2-1P43699 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX2-1P43699 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX2-1P43699 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NKX2-1P43699 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
NKX2-1P43699 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.43□□□□□ -0.1
NKX2-1P43699 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
NKX2-1P43699 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.43□□□□□ -0.1
NKX2-1P43699 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX2-1P43699 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
NKX2-1P43699 AC104390.1-201ENST00000555663 520 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms