Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 NEFHP1-201ENST00000412845 2629 ntBASIC22.2■■□□□ 1.14
COL15A1P39059 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC22.2■■□□□ 1.14
COL15A1P39059 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL15A1P39059 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL15A1P39059 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL15A1P39059 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL15A1P39059 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL15A1P39059 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC22.2■■□□□ 1.14
COL15A1P39059 LINC00982-205ENST00000420957 435 ntBASIC22.2■■□□□ 1.14
COL15A1P39059 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC22.2■■□□□ 1.14
COL15A1P39059 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
COL15A1P39059 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC22.2■■□□□ 1.14
COL15A1P39059 AP000344.2-201ENST00000512987 629 ntBASIC22.2■■□□□ 1.14
COL15A1P39059 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC22.2■■□□□ 1.14
COL15A1P39059 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC22.2■■□□□ 1.14
COL15A1P39059 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC22.2■■□□□ 1.14
COL15A1P39059 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL15A1P39059 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC22.2■■□□□ 1.14
COL15A1P39059 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC22.2■■□□□ 1.14
COL15A1P39059 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL15A1P39059 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL15A1P39059 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC22.2■■□□□ 1.14
COL15A1P39059 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
COL15A1P39059 AC138028.4-201ENST00000564984 1845 ntBASIC22.19■■□□□ 1.14
COL15A1P39059 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
COL15A1P39059 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL15A1P39059 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC22.19■■□□□ 1.14
COL15A1P39059 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL15A1P39059 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC22.19■■□□□ 1.14
COL15A1P39059 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL15A1P39059 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL15A1P39059 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL15A1P39059 AP000997.3-201ENST00000623333 2250 ntBASIC22.19■■□□□ 1.14
COL15A1P39059 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL15A1P39059 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC22.19■■□□□ 1.14
COL15A1P39059 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC22.19■■□□□ 1.14
COL15A1P39059 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
COL15A1P39059 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC22.19■■□□□ 1.14
COL15A1P39059 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
COL15A1P39059 GGTLC5P-201ENST00000617623 998 ntBASIC22.19■■□□□ 1.14
COL15A1P39059 CITED2-204ENST00000618718 901 ntTSL 2 BASIC22.19■■□□□ 1.14
COL15A1P39059 AC091812.2-201ENST00000619081 385 ntBASIC22.19■■□□□ 1.14
COL15A1P39059 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL15A1P39059 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
COL15A1P39059 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL15A1P39059 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL15A1P39059 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL15A1P39059 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL15A1P39059 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL15A1P39059 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
COL15A1P39059 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL15A1P39059 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC22.18■■□□□ 1.14
COL15A1P39059 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL15A1P39059 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22.18■■□□□ 1.14
COL15A1P39059 AC135050.7-201ENST00000624508 2218 ntBASIC22.18■■□□□ 1.14
COL15A1P39059 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL15A1P39059 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC22.18■■□□□ 1.14
COL15A1P39059 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL15A1P39059 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
COL15A1P39059 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
COL15A1P39059 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL15A1P39059 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
COL15A1P39059 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL15A1P39059 STOM-202ENST00000347359 870 ntTSL 2 BASIC22.18■■□□□ 1.14
COL15A1P39059 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL15A1P39059 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC22.18■■□□□ 1.14
COL15A1P39059 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL15A1P39059 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC22.18■■□□□ 1.14
COL15A1P39059 TSEN15P1-201ENST00000423257 515 ntBASIC22.18■■□□□ 1.14
COL15A1P39059 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC22.18■■□□□ 1.14
COL15A1P39059 IGHV3-52-201ENST00000519770 353 ntBASIC22.18■■□□□ 1.14
COL15A1P39059 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC22.18■■□□□ 1.14
COL15A1P39059 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC22.18■■□□□ 1.14
COL15A1P39059 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
COL15A1P39059 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL15A1P39059 AC093028.1-201ENST00000622998 982 ntBASIC22.18■■□□□ 1.14
COL15A1P39059 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL15A1P39059 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC22.18■■□□□ 1.14
COL15A1P39059 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
COL15A1P39059 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
COL15A1P39059 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
COL15A1P39059 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL15A1P39059 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
COL15A1P39059 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL15A1P39059 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
COL15A1P39059 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
COL15A1P39059 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
COL15A1P39059 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL15A1P39059 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL15A1P39059 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC22.17■■□□□ 1.14
COL15A1P39059 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC22.17■■□□□ 1.14
COL15A1P39059 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL15A1P39059 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
COL15A1P39059 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC22.17■■□□□ 1.14
COL15A1P39059 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC22.17■■□□□ 1.14
COL15A1P39059 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL15A1P39059 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC22.17■■□□□ 1.14
COL15A1P39059 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC22.17■■□□□ 1.14
COL15A1P39059 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL15A1P39059 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms