Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCNN1AP37088 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCNN1AP37088 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCNN1AP37088 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCNN1AP37088 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCNN1AP37088 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.28■□□□□ 0.52
SCNN1AP37088 AC116353.5-201ENST00000638148 1699 ntBASIC18.28■□□□□ 0.52
SCNN1AP37088 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCNN1AP37088 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCNN1AP37088 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCNN1AP37088 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCNN1AP37088 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SCNN1AP37088 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SCNN1AP37088 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SCNN1AP37088 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SCNN1AP37088 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCNN1AP37088 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCNN1AP37088 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.28■□□□□ 0.52
SCNN1AP37088 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCNN1AP37088 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.28■□□□□ 0.52
SCNN1AP37088 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.28■□□□□ 0.52
SCNN1AP37088 REXO1L6P-202ENST00000619970 1078 ntBASIC18.28■□□□□ 0.52
SCNN1AP37088 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCNN1AP37088 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SCNN1AP37088 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.28■□□□□ 0.52
SCNN1AP37088 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.28■□□□□ 0.52
SCNN1AP37088 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCNN1AP37088 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SCNN1AP37088 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCNN1AP37088 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SCNN1AP37088 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SCNN1AP37088 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SCNN1AP37088 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCNN1AP37088 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCNN1AP37088 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.27■□□□□ 0.52
SCNN1AP37088 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCNN1AP37088 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.27■□□□□ 0.52
SCNN1AP37088 CROCCP2-202ENST00000412962 2773 ntBASIC18.27■□□□□ 0.52
SCNN1AP37088 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCNN1AP37088 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCNN1AP37088 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCNN1AP37088 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCNN1AP37088 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.27■□□□□ 0.52
SCNN1AP37088 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCNN1AP37088 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCNN1AP37088 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCNN1AP37088 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCNN1AP37088 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCNN1AP37088 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.27■□□□□ 0.52
SCNN1AP37088 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.27■□□□□ 0.52
SCNN1AP37088 SIGLEC30P-201ENST00000455569 941 ntBASIC18.27■□□□□ 0.52
SCNN1AP37088 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCNN1AP37088 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.27■□□□□ 0.52
SCNN1AP37088 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCNN1AP37088 AL732292.2-201ENST00000609649 430 ntBASIC18.27■□□□□ 0.52
SCNN1AP37088 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.27■□□□□ 0.52
SCNN1AP37088 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.27■□□□□ 0.52
SCNN1AP37088 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCNN1AP37088 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCNN1AP37088 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCNN1AP37088 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SCNN1AP37088 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCNN1AP37088 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SCNN1AP37088 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.27■□□□□ 0.51
SCNN1AP37088 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.27■□□□□ 0.51
SCNN1AP37088 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCNN1AP37088 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.26■□□□□ 0.51
SCNN1AP37088 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SCNN1AP37088 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCNN1AP37088 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SCNN1AP37088 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.26■□□□□ 0.51
SCNN1AP37088 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCNN1AP37088 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCNN1AP37088 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCNN1AP37088 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCNN1AP37088 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.26■□□□□ 0.51
SCNN1AP37088 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCNN1AP37088 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCNN1AP37088 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
SCNN1AP37088 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.26■□□□□ 0.51
SCNN1AP37088 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCNN1AP37088 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.26■□□□□ 0.51
SCNN1AP37088 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCNN1AP37088 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCNN1AP37088 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SCNN1AP37088 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SCNN1AP37088 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.26■□□□□ 0.51
SCNN1AP37088 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.26■□□□□ 0.51
SCNN1AP37088 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.26■□□□□ 0.51
SCNN1AP37088 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.26■□□□□ 0.51
SCNN1AP37088 PRYP5-201ENST00000451909 266 ntBASIC18.26■□□□□ 0.51
SCNN1AP37088 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.26■□□□□ 0.51
SCNN1AP37088 LINC01711-201ENST00000598340 967 ntBASIC18.26■□□□□ 0.51
SCNN1AP37088 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCNN1AP37088 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.26■□□□□ 0.51
SCNN1AP37088 AL139288.1-201ENST00000623748 933 ntBASIC18.26■□□□□ 0.51
SCNN1AP37088 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCNN1AP37088 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.26■□□□□ 0.51
SCNN1AP37088 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCNN1AP37088 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms