Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPA3P35244 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPA3P35244 TSPY5P-201ENST00000426936 936 ntBASIC17.83■□□□□ 0.44
RPA3P35244 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RPA3P35244 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.83■□□□□ 0.44
RPA3P35244 AC092647.4-201ENST00000457211 535 ntBASIC17.83■□□□□ 0.44
RPA3P35244 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.83■□□□□ 0.44
RPA3P35244 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.83■□□□□ 0.44
RPA3P35244 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RPA3P35244 MIR3917-201ENST00000580971 93 ntBASIC17.83■□□□□ 0.44
RPA3P35244 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.83■□□□□ 0.44
RPA3P35244 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RPA3P35244 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
RPA3P35244 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPA3P35244 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
RPA3P35244 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.83■□□□□ 0.44
RPA3P35244 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.83■□□□□ 0.44
RPA3P35244 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPA3P35244 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.82■□□□□ 0.44
RPA3P35244 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPA3P35244 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.82■□□□□ 0.44
RPA3P35244 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.82■□□□□ 0.44
RPA3P35244 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.82■□□□□ 0.44
RPA3P35244 AC022898.2-201ENST00000616822 1312 ntBASIC17.82■□□□□ 0.44
RPA3P35244 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.82■□□□□ 0.44
RPA3P35244 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.82■□□□□ 0.44
RPA3P35244 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RPA3P35244 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.82■□□□□ 0.44
RPA3P35244 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RPA3P35244 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPA3P35244 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPA3P35244 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPA3P35244 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPA3P35244 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RPA3P35244 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.82■□□□□ 0.44
RPA3P35244 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPA3P35244 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPA3P35244 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPA3P35244 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RPA3P35244 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RPA3P35244 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPA3P35244 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.82■□□□□ 0.44
RPA3P35244 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPA3P35244 AC009949.1-201ENST00000623048 1830 ntBASIC17.82■□□□□ 0.44
RPA3P35244 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPA3P35244 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPA3P35244 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPA3P35244 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
RPA3P35244 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPA3P35244 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.81■□□□□ 0.44
RPA3P35244 PCDH8P1-201ENST00000428983 2773 ntBASIC17.81■□□□□ 0.44
RPA3P35244 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.81■□□□□ 0.44
RPA3P35244 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.81■□□□□ 0.44
RPA3P35244 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RPA3P35244 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
RPA3P35244 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RPA3P35244 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPA3P35244 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RPA3P35244 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.81■□□□□ 0.44
RPA3P35244 HOMER2P1-201ENST00000455653 964 ntBASIC17.81■□□□□ 0.44
RPA3P35244 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.81■□□□□ 0.44
RPA3P35244 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.81■□□□□ 0.44
RPA3P35244 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RPA3P35244 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.81■□□□□ 0.44
RPA3P35244 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
RPA3P35244 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPA3P35244 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.81■□□□□ 0.44
RPA3P35244 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.81■□□□□ 0.44
RPA3P35244 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RPA3P35244 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPA3P35244 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPA3P35244 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPA3P35244 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPA3P35244 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RPA3P35244 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RPA3P35244 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPA3P35244 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPA3P35244 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPA3P35244 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPA3P35244 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RPA3P35244 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPA3P35244 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPA3P35244 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPA3P35244 DUX4L26-201ENST00000489078 1255 ntBASIC17.8■□□□□ 0.44
RPA3P35244 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPA3P35244 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.8■□□□□ 0.44
RPA3P35244 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.8■□□□□ 0.44
RPA3P35244 LINC01238-205ENST00000567549 1107 ntBASIC17.8■□□□□ 0.44
RPA3P35244 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPA3P35244 LINC01451-201ENST00000623792 534 ntBASIC17.8■□□□□ 0.44
RPA3P35244 AL157888.1-201ENST00000631930 593 ntBASIC17.8■□□□□ 0.44
RPA3P35244 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPA3P35244 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPA3P35244 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RPA3P35244 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPA3P35244 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.8■□□□□ 0.44
RPA3P35244 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
RPA3P35244 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.8■□□□□ 0.44
RPA3P35244 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPA3P35244 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms