Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CASP1P29466 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CASP1P29466 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CASP1P29466 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CASP1P29466 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.68■□□□□ 0.74
CASP1P29466 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CASP1P29466 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.68■□□□□ 0.74
CASP1P29466 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CASP1P29466 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASP1P29466 AL121956.5-201ENST00000625261 221 ntBASIC19.68■□□□□ 0.74
CASP1P29466 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CASP1P29466 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASP1P29466 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.68■□□□□ 0.74
CASP1P29466 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CASP1P29466 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CASP1P29466 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASP1P29466 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CASP1P29466 AC016734.2-201ENST00000624325 1377 ntBASIC19.68■□□□□ 0.74
CASP1P29466 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.68■□□□□ 0.74
CASP1P29466 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CASP1P29466 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASP1P29466 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.67■□□□□ 0.74
CASP1P29466 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASP1P29466 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CASP1P29466 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASP1P29466 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASP1P29466 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CASP1P29466 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
CASP1P29466 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASP1P29466 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.67■□□□□ 0.74
CASP1P29466 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.67■□□□□ 0.74
CASP1P29466 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASP1P29466 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASP1P29466 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CASP1P29466 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASP1P29466 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CASP1P29466 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.67■□□□□ 0.74
CASP1P29466 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
CASP1P29466 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.67■□□□□ 0.74
CASP1P29466 KRT8P26-201ENST00000534154 1276 ntBASIC19.67■□□□□ 0.74
CASP1P29466 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.67■□□□□ 0.74
CASP1P29466 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
CASP1P29466 AL353801.3-201ENST00000609898 542 ntBASIC19.67■□□□□ 0.74
CASP1P29466 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASP1P29466 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASP1P29466 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASP1P29466 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASP1P29466 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASP1P29466 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASP1P29466 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASP1P29466 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CASP1P29466 AC125634.1-201ENST00000438758 1403 ntBASIC19.67■□□□□ 0.74
CASP1P29466 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.67■□□□□ 0.74
CASP1P29466 AD000864.1-201ENST00000624076 2295 ntBASIC19.67■□□□□ 0.74
CASP1P29466 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASP1P29466 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.67■□□□□ 0.74
CASP1P29466 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASP1P29466 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CASP1P29466 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CASP1P29466 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.66■□□□□ 0.74
CASP1P29466 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP1P29466 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CASP1P29466 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP1P29466 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.66■□□□□ 0.74
CASP1P29466 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP1P29466 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP1P29466 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP1P29466 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP1P29466 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP1P29466 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.66■□□□□ 0.74
CASP1P29466 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP1P29466 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.66■□□□□ 0.74
CASP1P29466 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.66■□□□□ 0.74
CASP1P29466 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.66■□□□□ 0.74
CASP1P29466 AC090340.1-201ENST00000620778 4980 ntBASIC19.66■□□□□ 0.74
CASP1P29466 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.66■□□□□ 0.74
CASP1P29466 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CASP1P29466 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP1P29466 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP1P29466 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP1P29466 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CASP1P29466 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.66■□□□□ 0.74
CASP1P29466 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP1P29466 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP1P29466 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP1P29466 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CASP1P29466 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
CASP1P29466 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.65■□□□□ 0.74
CASP1P29466 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASP1P29466 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASP1P29466 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASP1P29466 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.65■□□□□ 0.74
CASP1P29466 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASP1P29466 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CASP1P29466 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CASP1P29466 COX5BP2-201ENST00000392354 334 ntBASIC19.65■□□□□ 0.74
CASP1P29466 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.65■□□□□ 0.74
CASP1P29466 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.65■□□□□ 0.74
CASP1P29466 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.65■□□□□ 0.74
CASP1P29466 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms