Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 AL136038.4-201ENST00000603606 1261 ntBASIC16.39■□□□□ 0.21
TNFRSF1BP20333 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 AL138966.2-201ENST00000621997 464 ntBASIC16.39■□□□□ 0.21
TNFRSF1BP20333 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 AC034232.1-201ENST00000506026 1064 ntBASIC16.38■□□□□ 0.21
TNFRSF1BP20333 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFRSF1BP20333 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 AC079328.2-201ENST00000561241 3354 ntBASIC16.37■□□□□ 0.21
TNFRSF1BP20333 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 KRT18P22-201ENST00000402024 1347 ntBASIC16.37■□□□□ 0.21
TNFRSF1BP20333 AGGF1P2-201ENST00000426656 2106 ntBASIC16.37■□□□□ 0.21
TNFRSF1BP20333 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TNFRSF1BP20333 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFRSF1BP20333 AL596275.1-201ENST00000423464 877 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms