Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL11A2P13942 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL11A2P13942 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.32■■□□□ 1
COL11A2P13942 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL11A2P13942 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
COL11A2P13942 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
COL11A2P13942 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL11A2P13942 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC21.32■■□□□ 1
COL11A2P13942 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
COL11A2P13942 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL11A2P13942 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL11A2P13942 AC107890.1-201ENST00000422478 521 ntBASIC21.32■■□□□ 1
COL11A2P13942 AL592309.1-201ENST00000443127 649 ntBASIC21.32■■□□□ 1
COL11A2P13942 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL11A2P13942 BAD-207ENST00000544785 525 ntTSL 3 BASIC21.32■■□□□ 1
COL11A2P13942 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.32■■□□□ 1
COL11A2P13942 AC140878.1-201ENST00000565277 250 ntBASIC21.32■■□□□ 1
COL11A2P13942 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL11A2P13942 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.32■■□□□ 1
COL11A2P13942 AC008761.3-201ENST00000624803 892 ntBASIC21.32■■□□□ 1
COL11A2P13942 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL11A2P13942 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.32■■□□□ 1
COL11A2P13942 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.32■■□□□ 1
COL11A2P13942 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL11A2P13942 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
COL11A2P13942 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.31■■□□□ 1
COL11A2P13942 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.31■■□□□ 1
COL11A2P13942 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
COL11A2P13942 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.31■■□□□ 1
COL11A2P13942 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
COL11A2P13942 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
COL11A2P13942 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.31■■□□□ 1
COL11A2P13942 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
COL11A2P13942 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL11A2P13942 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC21.31■■□□□ 1
COL11A2P13942 SLC25A39P2-201ENST00000537614 270 ntBASIC21.31■■□□□ 1
COL11A2P13942 DUX4L17-201ENST00000557360 1267 ntBASIC21.31■■□□□ 1
COL11A2P13942 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC21.31■■□□□ 1
COL11A2P13942 FO538757.1-201ENST00000623083 1397 ntBASIC21.31■■□□□ 1
COL11A2P13942 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.31■■□□□ 1
COL11A2P13942 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
COL11A2P13942 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
COL11A2P13942 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
COL11A2P13942 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL11A2P13942 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
COL11A2P13942 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL11A2P13942 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL11A2P13942 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL11A2P13942 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.3■■□□□ 1
COL11A2P13942 FAM207CP-201ENST00000443486 507 ntBASIC21.3■■□□□ 1
COL11A2P13942 TSPY16P-201ENST00000449843 468 ntBASIC21.3■■□□□ 1
COL11A2P13942 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC21.3■■□□□ 1
COL11A2P13942 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.3■■□□□ 1
COL11A2P13942 BSG-214ENST00000614867 960 ntTSL 3 BASIC21.3■■□□□ 1
COL11A2P13942 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC21.3■■□□□ 1
COL11A2P13942 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL11A2P13942 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL11A2P13942 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL11A2P13942 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL11A2P13942 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.3■■□□□ 1
COL11A2P13942 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.3■■□□□ 1
COL11A2P13942 AC046185.3-201ENST00000623228 1824 ntBASIC21.3■■□□□ 1
COL11A2P13942 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.3■■□□□ 1
COL11A2P13942 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.3■■□□□ 1
COL11A2P13942 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL11A2P13942 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL11A2P13942 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL11A2P13942 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
COL11A2P13942 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
COL11A2P13942 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.3■■□□□ 1
COL11A2P13942 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.3■■□□□ 1
COL11A2P13942 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL11A2P13942 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
COL11A2P13942 AC092580.3-201ENST00000430932 139 ntBASIC21.29■■□□□ 1
COL11A2P13942 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC21.29■■□□□ 1
COL11A2P13942 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC21.29■■□□□ 1
COL11A2P13942 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC21.29■■□□□ 1
COL11A2P13942 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.29■■□□□ 1
COL11A2P13942 AC135776.1-201ENST00000319817 2481 ntBASIC21.29■■□□□ 1
COL11A2P13942 AL020996.1-203ENST00000536896 2307 ntBASIC21.29■■□□□ 1
COL11A2P13942 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL11A2P13942 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL11A2P13942 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
COL11A2P13942 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL11A2P13942 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL11A2P13942 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL11A2P13942 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL11A2P13942 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL11A2P13942 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
COL11A2P13942 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL11A2P13942 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL11A2P13942 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL11A2P13942 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL11A2P13942 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL11A2P13942 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
COL11A2P13942 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL11A2P13942 RPL30-202ENST00000396070 440 ntTSL 2 BASIC21.29■■□□□ 1
COL11A2P13942 AC005237.2-201ENST00000434368 219 ntBASIC21.29■■□□□ 1
COL11A2P13942 CRB3P1-201ENST00000449338 276 ntBASIC21.29■■□□□ 1
COL11A2P13942 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms