Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.34■□□□□ 0.21
UBL4AP11441 AC090616.6-201ENST00000582640 721 ntBASIC16.34■□□□□ 0.21
UBL4AP11441 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
UBL4AP11441 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.34■□□□□ 0.21
UBL4AP11441 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBL4AP11441 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.34■□□□□ 0.21
UBL4AP11441 C8orf49-201ENST00000525043 1968 ntBASIC16.34■□□□□ 0.21
UBL4AP11441 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.34■□□□□ 0.21
UBL4AP11441 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.34■□□□□ 0.21
UBL4AP11441 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
UBL4AP11441 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
UBL4AP11441 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL4AP11441 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL4AP11441 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL4AP11441 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL4AP11441 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBL4AP11441 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
UBL4AP11441 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBL4AP11441 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBL4AP11441 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBL4AP11441 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.33■□□□□ 0.21
UBL4AP11441 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UBL4AP11441 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBL4AP11441 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
UBL4AP11441 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBL4AP11441 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBL4AP11441 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBL4AP11441 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.33■□□□□ 0.2
UBL4AP11441 BX276092.5-203ENST00000456199 560 ntBASIC16.33■□□□□ 0.2
UBL4AP11441 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.33■□□□□ 0.2
UBL4AP11441 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.33■□□□□ 0.2
UBL4AP11441 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
UBL4AP11441 AL592071.1-201ENST00000611956 408 ntBASIC16.33■□□□□ 0.2
UBL4AP11441 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
UBL4AP11441 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBL4AP11441 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
UBL4AP11441 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBL4AP11441 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBL4AP11441 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
UBL4AP11441 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBL4AP11441 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBL4AP11441 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.33■□□□□ 0.2
UBL4AP11441 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBL4AP11441 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
UBL4AP11441 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
UBL4AP11441 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.33■□□□□ 0.2
UBL4AP11441 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.33■□□□□ 0.2
UBL4AP11441 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBL4AP11441 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
UBL4AP11441 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
UBL4AP11441 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.32■□□□□ 0.2
UBL4AP11441 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.32■□□□□ 0.2
UBL4AP11441 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.32■□□□□ 0.2
UBL4AP11441 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
UBL4AP11441 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.32■□□□□ 0.2
UBL4AP11441 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.32■□□□□ 0.2
UBL4AP11441 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.32■□□□□ 0.2
UBL4AP11441 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
UBL4AP11441 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.32■□□□□ 0.2
UBL4AP11441 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
UBL4AP11441 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.32■□□□□ 0.2
UBL4AP11441 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.32■□□□□ 0.2
UBL4AP11441 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.32■□□□□ 0.2
UBL4AP11441 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
UBL4AP11441 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.32■□□□□ 0.2
UBL4AP11441 AL121672.3-201ENST00000608644 468 ntBASIC16.32■□□□□ 0.2
UBL4AP11441 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
UBL4AP11441 IGHV3-41-201ENST00000613121 348 ntBASIC16.32■□□□□ 0.2
UBL4AP11441 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBL4AP11441 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.31■□□□□ 0.2
UBL4AP11441 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.31■□□□□ 0.2
UBL4AP11441 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
UBL4AP11441 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms