Protein–RNA interactions for Protein: P0C7M3

SFTA3, Surfactant-associated protein 3, humanhuman

Predictions only

Length 94 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTA3P0C7M3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTA3P0C7M3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.13□□□□□ -0.15
SFTA3P0C7M3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTA3P0C7M3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.13□□□□□ -0.15
SFTA3P0C7M3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.13□□□□□ -0.15
SFTA3P0C7M3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTA3P0C7M3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTA3P0C7M3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SFTA3P0C7M3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.13□□□□□ -0.15
SFTA3P0C7M3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SFTA3P0C7M3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SFTA3P0C7M3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SFTA3P0C7M3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
SFTA3P0C7M3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.13□□□□□ -0.15
SFTA3P0C7M3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTA3P0C7M3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SFTA3P0C7M3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SFTA3P0C7M3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 LINC00304-203ENST00000565008 1864 ntBASIC14.12□□□□□ -0.15
SFTA3P0C7M3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SFTA3P0C7M3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 NORAD-201ENST00000565493 5339 ntBASIC14.11□□□□□ -0.15
SFTA3P0C7M3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 NCF1B-203ENST00000435988 1254 ntBASIC14.11□□□□□ -0.15
SFTA3P0C7M3 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.11□□□□□ -0.15
SFTA3P0C7M3 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 AC092171.3-201ENST00000610122 2651 ntBASIC14.11□□□□□ -0.15
SFTA3P0C7M3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 HLA-J-201ENST00000462773 1622 ntBASIC14.11□□□□□ -0.15
SFTA3P0C7M3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SFTA3P0C7M3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTA3P0C7M3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.1□□□□□ -0.15
SFTA3P0C7M3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTA3P0C7M3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.1□□□□□ -0.15
SFTA3P0C7M3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTA3P0C7M3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTA3P0C7M3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.1□□□□□ -0.15
SFTA3P0C7M3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms