Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 AC007663.1-201ENST00000438948 1240 ntBASIC17.09■□□□□ 0.33
LINGO3P0C6S8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 MYC-208ENST00000641036 567 ntBASIC17.09■□□□□ 0.33
LINGO3P0C6S8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
LINGO3P0C6S8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
LINGO3P0C6S8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
LINGO3P0C6S8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINGO3P0C6S8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINGO3P0C6S8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
LINGO3P0C6S8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.08■□□□□ 0.33
LINGO3P0C6S8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINGO3P0C6S8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LINGO3P0C6S8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.08■□□□□ 0.33
LINGO3P0C6S8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINGO3P0C6S8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 INGX-201ENST00000359239 846 ntBASIC17.08■□□□□ 0.32
LINGO3P0C6S8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 MCCD1P1-208ENST00000445732 328 ntBASIC17.08■□□□□ 0.32
LINGO3P0C6S8 AP003041.3-201ENST00000527151 707 ntBASIC17.08■□□□□ 0.32
LINGO3P0C6S8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 AC008556.1-201ENST00000610908 2040 ntBASIC17.08■□□□□ 0.32
LINGO3P0C6S8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINGO3P0C6S8 AC022188.1-201ENST00000620960 1664 ntBASIC17.07■□□□□ 0.32
LINGO3P0C6S8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 AL023284.2-201ENST00000405850 579 ntBASIC17.07■□□□□ 0.32
LINGO3P0C6S8 AC128688.1-201ENST00000487626 519 ntBASIC17.07■□□□□ 0.32
LINGO3P0C6S8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 AC010653.2-201ENST00000623505 997 ntBASIC17.07■□□□□ 0.32
LINGO3P0C6S8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINGO3P0C6S8 GPAT2P1-201ENST00000444924 1672 ntBASIC17.07■□□□□ 0.32
LINGO3P0C6S8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms