Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.13■□□□□ 0.97
CHGBP05060 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.13■□□□□ 0.97
CHGBP05060 RBM17P3-201ENST00000417687 1192 ntBASIC21.13■□□□□ 0.97
CHGBP05060 AC103564.2-201ENST00000432853 1299 ntBASIC21.13■□□□□ 0.97
CHGBP05060 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.13■□□□□ 0.97
CHGBP05060 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.13■□□□□ 0.97
CHGBP05060 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
CHGBP05060 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHGBP05060 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.13■□□□□ 0.97
CHGBP05060 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.13■□□□□ 0.97
CHGBP05060 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHGBP05060 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CHGBP05060 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHGBP05060 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHGBP05060 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHGBP05060 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.13■□□□□ 0.97
CHGBP05060 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.13■□□□□ 0.97
CHGBP05060 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.13■□□□□ 0.97
CHGBP05060 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHGBP05060 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHGBP05060 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHGBP05060 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.12■□□□□ 0.97
CHGBP05060 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHGBP05060 AC133963.1-201ENST00000504166 1679 ntBASIC21.12■□□□□ 0.97
CHGBP05060 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CHGBP05060 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHGBP05060 HLA-J-201ENST00000462773 1622 ntBASIC21.12■□□□□ 0.97
CHGBP05060 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.12■□□□□ 0.97
CHGBP05060 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHGBP05060 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHGBP05060 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHGBP05060 AC018712.1-201ENST00000455767 687 ntBASIC21.12■□□□□ 0.97
CHGBP05060 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
CHGBP05060 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.12■□□□□ 0.97
CHGBP05060 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHGBP05060 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.12■□□□□ 0.97
CHGBP05060 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
CHGBP05060 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.12■□□□□ 0.97
CHGBP05060 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHGBP05060 AL356309.3-201ENST00000624132 1934 ntBASIC21.12■□□□□ 0.97
CHGBP05060 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.11■□□□□ 0.97
CHGBP05060 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CHGBP05060 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CHGBP05060 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.11■□□□□ 0.97
CHGBP05060 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.11■□□□□ 0.97
CHGBP05060 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 AC139713.2-201ENST00000641328 2723 ntBASIC21.11■□□□□ 0.97
CHGBP05060 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.11■□□□□ 0.97
CHGBP05060 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.11■□□□□ 0.97
CHGBP05060 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CHGBP05060 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CHGBP05060 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.11■□□□□ 0.97
CHGBP05060 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CHGBP05060 RNPS1P1-201ENST00000507437 918 ntBASIC21.11■□□□□ 0.97
CHGBP05060 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.11■□□□□ 0.97
CHGBP05060 AC012640.2-201ENST00000561606 901 ntBASIC21.11■□□□□ 0.97
CHGBP05060 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.11■□□□□ 0.97
CHGBP05060 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.11■□□□□ 0.97
CHGBP05060 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.11■□□□□ 0.97
CHGBP05060 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.11■□□□□ 0.97
CHGBP05060 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.11■□□□□ 0.97
CHGBP05060 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 AC073592.4-201ENST00000623827 446 ntBASIC21.11■□□□□ 0.97
CHGBP05060 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CHGBP05060 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHGBP05060 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CHGBP05060 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHGBP05060 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHGBP05060 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.1■□□□□ 0.97
CHGBP05060 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CHGBP05060 RPS2P1-201ENST00000434010 821 ntBASIC21.1■□□□□ 0.97
CHGBP05060 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.1■□□□□ 0.97
CHGBP05060 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.1■□□□□ 0.97
CHGBP05060 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHGBP05060 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.1■□□□□ 0.97
CHGBP05060 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.1■□□□□ 0.97
CHGBP05060 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.1■□□□□ 0.97
CHGBP05060 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CHGBP05060 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.1■□□□□ 0.97
CHGBP05060 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHGBP05060 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.1■□□□□ 0.97
CHGBP05060 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms