Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
TUBB4AP04350 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TUBB4AP04350 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBB4AP04350 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TUBB4AP04350 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.89■□□□□ 0.61
TUBB4AP04350 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TUBB4AP04350 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TUBB4AP04350 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBB4AP04350 KRT17P3-201ENST00000420566 1262 ntBASIC18.89■□□□□ 0.61
TUBB4AP04350 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TUBB4AP04350 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.89■□□□□ 0.61
TUBB4AP04350 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.89■□□□□ 0.61
TUBB4AP04350 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.89■□□□□ 0.61
TUBB4AP04350 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.89■□□□□ 0.61
TUBB4AP04350 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.89■□□□□ 0.61
TUBB4AP04350 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TUBB4AP04350 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TUBB4AP04350 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBB4AP04350 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBB4AP04350 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TUBB4AP04350 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.89■□□□□ 0.61
TUBB4AP04350 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TUBB4AP04350 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TUBB4AP04350 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.89■□□□□ 0.61
TUBB4AP04350 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.89■□□□□ 0.61
TUBB4AP04350 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TUBB4AP04350 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.89■□□□□ 0.61
TUBB4AP04350 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBB4AP04350 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.89■□□□□ 0.61
TUBB4AP04350 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBB4AP04350 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBB4AP04350 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TUBB4AP04350 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBB4AP04350 AC105917.1-201ENST00000506637 2539 ntBASIC18.89■□□□□ 0.61
TUBB4AP04350 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TUBB4AP04350 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB4AP04350 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB4AP04350 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB4AP04350 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB4AP04350 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB4AP04350 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.88■□□□□ 0.61
TUBB4AP04350 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.88■□□□□ 0.61
TUBB4AP04350 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB4AP04350 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB4AP04350 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB4AP04350 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB4AP04350 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TUBB4AP04350 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.88■□□□□ 0.61
TUBB4AP04350 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.88■□□□□ 0.61
TUBB4AP04350 AL355355.2-201ENST00000442321 338 ntBASIC18.88■□□□□ 0.61
TUBB4AP04350 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.88■□□□□ 0.61
TUBB4AP04350 AC124947.2-201ENST00000547118 1133 ntBASIC18.88■□□□□ 0.61
TUBB4AP04350 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.88■□□□□ 0.61
TUBB4AP04350 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.88■□□□□ 0.61
TUBB4AP04350 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.88■□□□□ 0.61
TUBB4AP04350 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TUBB4AP04350 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB4AP04350 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB4AP04350 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.88■□□□□ 0.61
TUBB4AP04350 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TUBB4AP04350 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB4AP04350 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.88■□□□□ 0.61
TUBB4AP04350 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TUBB4AP04350 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB4AP04350 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB4AP04350 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB4AP04350 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.88■□□□□ 0.61
TUBB4AP04350 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBB4AP04350 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TUBB4AP04350 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB4AP04350 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB4AP04350 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB4AP04350 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB4AP04350 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TUBB4AP04350 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB4AP04350 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB4AP04350 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB4AP04350 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB4AP04350 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB4AP04350 ABHD17AP1-201ENST00000358206 933 ntBASIC18.87■□□□□ 0.61
TUBB4AP04350 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
TUBB4AP04350 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB4AP04350 KRASP1-201ENST00000407852 552 ntBASIC18.87■□□□□ 0.61
TUBB4AP04350 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB4AP04350 AL353807.1-201ENST00000427475 662 ntBASIC18.87■□□□□ 0.61
TUBB4AP04350 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TUBB4AP04350 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.87■□□□□ 0.61
TUBB4AP04350 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.87■□□□□ 0.61
TUBB4AP04350 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TUBB4AP04350 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TUBB4AP04350 AC011506.1-201ENST00000474329 610 ntBASIC18.87■□□□□ 0.61
TUBB4AP04350 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.87■□□□□ 0.61
TUBB4AP04350 UNC93B5-201ENST00000530315 699 ntBASIC18.87■□□□□ 0.61
TUBB4AP04350 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.87■□□□□ 0.61
TUBB4AP04350 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.87■□□□□ 0.61
TUBB4AP04350 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB4AP04350 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.87■□□□□ 0.61
TUBB4AP04350 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.87■□□□□ 0.61
TUBB4AP04350 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TUBB4AP04350 MIR6786-201ENST00000616843 113 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms