Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LGI1O95970 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LGI1O95970 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LGI1O95970 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.29■□□□□ 0.2
LGI1O95970 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LGI1O95970 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.29■□□□□ 0.2
LGI1O95970 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.29■□□□□ 0.2
LGI1O95970 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LGI1O95970 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LGI1O95970 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LGI1O95970 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
LGI1O95970 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.28■□□□□ 0.2
LGI1O95970 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LGI1O95970 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.28■□□□□ 0.2
LGI1O95970 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LGI1O95970 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 KRT18P38-201ENST00000449496 1282 ntBASIC16.28■□□□□ 0.2
LGI1O95970 HOMER2P1-201ENST00000455653 964 ntBASIC16.28■□□□□ 0.2
LGI1O95970 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.28■□□□□ 0.2
LGI1O95970 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.28■□□□□ 0.2
LGI1O95970 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.28■□□□□ 0.2
LGI1O95970 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.28■□□□□ 0.2
LGI1O95970 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
LGI1O95970 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LGI1O95970 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LGI1O95970 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LGI1O95970 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LGI1O95970 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
LGI1O95970 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
LGI1O95970 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LGI1O95970 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LGI1O95970 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LGI1O95970 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.27■□□□□ 0.2
LGI1O95970 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LGI1O95970 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LGI1O95970 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.27■□□□□ 0.2
LGI1O95970 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.27■□□□□ 0.2
LGI1O95970 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LGI1O95970 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.27■□□□□ 0.2
LGI1O95970 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LGI1O95970 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LGI1O95970 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LGI1O95970 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LGI1O95970 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LGI1O95970 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
LGI1O95970 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LGI1O95970 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LGI1O95970 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.27■□□□□ 0.19
LGI1O95970 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
LGI1O95970 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LGI1O95970 LINC01311-201ENST00000565162 1445 ntBASIC16.27■□□□□ 0.19
LGI1O95970 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.27■□□□□ 0.19
LGI1O95970 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
LGI1O95970 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
LGI1O95970 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
LGI1O95970 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
LGI1O95970 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
LGI1O95970 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
LGI1O95970 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGI1O95970 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGI1O95970 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGI1O95970 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LGI1O95970 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LGI1O95970 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LGI1O95970 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGI1O95970 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGI1O95970 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LGI1O95970 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.26■□□□□ 0.19
LGI1O95970 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LGI1O95970 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LGI1O95970 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.26■□□□□ 0.19
LGI1O95970 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.26■□□□□ 0.19
LGI1O95970 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGI1O95970 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGI1O95970 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.26■□□□□ 0.19
LGI1O95970 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.26■□□□□ 0.19
LGI1O95970 AL359075.1-203ENST00000462729 1002 ntBASIC16.26■□□□□ 0.19
LGI1O95970 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LGI1O95970 AC063952.2-201ENST00000498792 1227 ntBASIC16.26■□□□□ 0.19
LGI1O95970 AC022616.7-201ENST00000525383 220 ntBASIC16.26■□□□□ 0.19
LGI1O95970 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms