Protein–RNA interactions for Protein: O94876

TMCC1, Transmembrane and coiled-coil domains protein 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1O94876 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMCC1O94876 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMCC1O94876 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.12■□□□□ 0.49
TMCC1O94876 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
TMCC1O94876 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TMCC1O94876 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.12■□□□□ 0.49
TMCC1O94876 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
TMCC1O94876 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.12■□□□□ 0.49
TMCC1O94876 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.12■□□□□ 0.49
TMCC1O94876 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.12■□□□□ 0.49
TMCC1O94876 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.12■□□□□ 0.49
TMCC1O94876 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.12■□□□□ 0.49
TMCC1O94876 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TMCC1O94876 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.12■□□□□ 0.49
TMCC1O94876 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.12■□□□□ 0.49
TMCC1O94876 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.12■□□□□ 0.49
TMCC1O94876 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMCC1O94876 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.11■□□□□ 0.49
TMCC1O94876 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMCC1O94876 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.11■□□□□ 0.49
TMCC1O94876 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.11■□□□□ 0.49
TMCC1O94876 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMCC1O94876 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMCC1O94876 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
TMCC1O94876 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
TMCC1O94876 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.11■□□□□ 0.49
TMCC1O94876 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.11■□□□□ 0.49
TMCC1O94876 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMCC1O94876 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMCC1O94876 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMCC1O94876 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMCC1O94876 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.11■□□□□ 0.49
TMCC1O94876 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.11■□□□□ 0.49
TMCC1O94876 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.11■□□□□ 0.49
TMCC1O94876 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.11■□□□□ 0.49
TMCC1O94876 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.11■□□□□ 0.49
TMCC1O94876 AC009533.2-201ENST00000543664 586 ntBASIC18.11■□□□□ 0.49
TMCC1O94876 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
TMCC1O94876 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.11■□□□□ 0.49
TMCC1O94876 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.11■□□□□ 0.49
TMCC1O94876 AL732292.2-201ENST00000609649 430 ntBASIC18.11■□□□□ 0.49
TMCC1O94876 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.11■□□□□ 0.49
TMCC1O94876 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TMCC1O94876 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TMCC1O94876 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMCC1O94876 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMCC1O94876 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.11■□□□□ 0.49
TMCC1O94876 TP73-AS1-210ENST00000637775 1455 ntBASIC18.11■□□□□ 0.49
TMCC1O94876 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMCC1O94876 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.11■□□□□ 0.49
TMCC1O94876 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMCC1O94876 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMCC1O94876 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMCC1O94876 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMCC1O94876 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMCC1O94876 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TMCC1O94876 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMCC1O94876 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMCC1O94876 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMCC1O94876 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMCC1O94876 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
TMCC1O94876 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMCC1O94876 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
TMCC1O94876 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMCC1O94876 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMCC1O94876 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMCC1O94876 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMCC1O94876 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMCC1O94876 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.1■□□□□ 0.49
TMCC1O94876 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMCC1O94876 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.1■□□□□ 0.49
TMCC1O94876 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMCC1O94876 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.1■□□□□ 0.49
TMCC1O94876 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMCC1O94876 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMCC1O94876 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.1■□□□□ 0.49
TMCC1O94876 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMCC1O94876 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.1■□□□□ 0.49
TMCC1O94876 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMCC1O94876 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMCC1O94876 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms