Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.85■□□□□ 0.45
PRAMEF11O60813 EMBP1-201ENST00000458200 901 ntBASIC17.85■□□□□ 0.45
PRAMEF11O60813 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEF11O60813 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEF11O60813 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEF11O60813 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEF11O60813 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.85■□□□□ 0.45
PRAMEF11O60813 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.85■□□□□ 0.45
PRAMEF11O60813 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.85■□□□□ 0.45
PRAMEF11O60813 MTDHP3-201ENST00000594186 672 ntBASIC17.85■□□□□ 0.45
PRAMEF11O60813 AC008608.2-201ENST00000606089 416 ntBASIC17.85■□□□□ 0.45
PRAMEF11O60813 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.85■□□□□ 0.45
PRAMEF11O60813 AC073592.4-201ENST00000623827 446 ntBASIC17.85■□□□□ 0.45
PRAMEF11O60813 AL138688.1-201ENST00000624851 1594 ntBASIC17.85■□□□□ 0.45
PRAMEF11O60813 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.85■□□□□ 0.45
PRAMEF11O60813 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEF11O60813 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEF11O60813 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PRAMEF11O60813 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF11O60813 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF11O60813 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.84■□□□□ 0.45
PRAMEF11O60813 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF11O60813 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF11O60813 AC079776.2-201ENST00000641154 1609 ntBASIC17.84■□□□□ 0.45
PRAMEF11O60813 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
PRAMEF11O60813 AC009336.1-201ENST00000608941 1553 ntBASIC17.84■□□□□ 0.45
PRAMEF11O60813 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF11O60813 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF11O60813 SIGLEC16-201ENST00000599858 1437 ntBASIC17.84■□□□□ 0.45
PRAMEF11O60813 FGFR3P6-201ENST00000457012 610 ntBASIC17.84■□□□□ 0.45
PRAMEF11O60813 STK19B-204ENST00000512515 211 ntBASIC17.84■□□□□ 0.45
PRAMEF11O60813 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
PRAMEF11O60813 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.84■□□□□ 0.45
PRAMEF11O60813 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.84■□□□□ 0.45
PRAMEF11O60813 AL691432.3-201ENST00000621860 400 ntBASIC17.84■□□□□ 0.45
PRAMEF11O60813 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.84■□□□□ 0.45
PRAMEF11O60813 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.84■□□□□ 0.45
PRAMEF11O60813 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PRAMEF11O60813 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF11O60813 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
PRAMEF11O60813 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PRAMEF11O60813 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.84■□□□□ 0.45
PRAMEF11O60813 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF11O60813 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF11O60813 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF11O60813 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.84■□□□□ 0.45
PRAMEF11O60813 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF11O60813 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF11O60813 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEF11O60813 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.83■□□□□ 0.45
PRAMEF11O60813 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
PRAMEF11O60813 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.83■□□□□ 0.45
PRAMEF11O60813 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.45
PRAMEF11O60813 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.83■□□□□ 0.45
PRAMEF11O60813 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEF11O60813 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.83■□□□□ 0.45
PRAMEF11O60813 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.83■□□□□ 0.45
PRAMEF11O60813 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEF11O60813 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEF11O60813 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.83■□□□□ 0.45
PRAMEF11O60813 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEF11O60813 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF11O60813 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
PRAMEF11O60813 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.83■□□□□ 0.44
PRAMEF11O60813 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.83■□□□□ 0.44
PRAMEF11O60813 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF11O60813 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF11O60813 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF11O60813 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
PRAMEF11O60813 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF11O60813 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.83■□□□□ 0.44
PRAMEF11O60813 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PRAMEF11O60813 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.83■□□□□ 0.44
PRAMEF11O60813 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PRAMEF11O60813 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.83■□□□□ 0.44
PRAMEF11O60813 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.83■□□□□ 0.44
PRAMEF11O60813 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF11O60813 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF11O60813 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF11O60813 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.83■□□□□ 0.44
PRAMEF11O60813 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PRAMEF11O60813 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF11O60813 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF11O60813 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF11O60813 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF11O60813 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF11O60813 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF11O60813 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.83■□□□□ 0.44
PRAMEF11O60813 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF11O60813 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF11O60813 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF11O60813 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF11O60813 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.82■□□□□ 0.44
PRAMEF11O60813 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF11O60813 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.82■□□□□ 0.44
PRAMEF11O60813 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PRAMEF11O60813 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF11O60813 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF11O60813 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PRAMEF11O60813 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms