Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 KRT18P3-201ENST00000451602 1288 ntBASIC14.16□□□□□ -0.14
HOXA3O43365 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.16□□□□□ -0.14
HOXA3O43365 PGAM5P1-201ENST00000518923 814 ntBASIC14.16□□□□□ -0.14
HOXA3O43365 DUTP2-201ENST00000519164 463 ntBASIC14.16□□□□□ -0.14
HOXA3O43365 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
HOXA3O43365 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.16□□□□□ -0.14
HOXA3O43365 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA3O43365 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA3O43365 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA3O43365 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA3O43365 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
HOXA3O43365 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA3O43365 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA3O43365 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA3O43365 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA3O43365 SIRPAP1-201ENST00000448467 1770 ntBASIC14.16□□□□□ -0.14
HOXA3O43365 AC020916.1-201ENST00000587762 1774 ntBASIC14.16□□□□□ -0.14
HOXA3O43365 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.16□□□□□ -0.14
HOXA3O43365 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.16□□□□□ -0.14
HOXA3O43365 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HOXA3O43365 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.16□□□□□ -0.14
HOXA3O43365 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA3O43365 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA3O43365 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA3O43365 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA3O43365 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HOXA3O43365 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.15□□□□□ -0.14
HOXA3O43365 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.15□□□□□ -0.14
HOXA3O43365 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA3O43365 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA3O43365 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
HOXA3O43365 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA3O43365 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA3O43365 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.15□□□□□ -0.14
HOXA3O43365 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA3O43365 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HOXA3O43365 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.15□□□□□ -0.14
HOXA3O43365 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA3O43365 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA3O43365 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA3O43365 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA3O43365 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA3O43365 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA3O43365 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA3O43365 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA3O43365 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.15□□□□□ -0.14
HOXA3O43365 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.15□□□□□ -0.14
HOXA3O43365 AC006557.2-201ENST00000592985 1240 ntBASIC14.15□□□□□ -0.14
HOXA3O43365 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA3O43365 AC073592.5-201ENST00000624854 528 ntBASIC14.15□□□□□ -0.14
HOXA3O43365 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA3O43365 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HOXA3O43365 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA3O43365 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA3O43365 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.15□□□□□ -0.14
HOXA3O43365 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
HOXA3O43365 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HOXA3O43365 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.15□□□□□ -0.14
HOXA3O43365 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.15□□□□□ -0.15
HOXA3O43365 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXA3O43365 AL096828.2-201ENST00000567259 1965 ntBASIC14.14□□□□□ -0.15
HOXA3O43365 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.14□□□□□ -0.15
HOXA3O43365 FZD10-202ENST00000539839 3282 ntBASIC14.14□□□□□ -0.15
HOXA3O43365 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HOXA3O43365 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXA3O43365 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXA3O43365 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HOXA3O43365 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXA3O43365 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
HOXA3O43365 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.14□□□□□ -0.15
HOXA3O43365 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXA3O43365 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HOXA3O43365 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXA3O43365 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXA3O43365 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HOXA3O43365 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXA3O43365 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.14□□□□□ -0.15
HOXA3O43365 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXA3O43365 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXA3O43365 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HOXA3O43365 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
HOXA3O43365 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.14□□□□□ -0.15
HOXA3O43365 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.14□□□□□ -0.15
HOXA3O43365 COX5BP2-201ENST00000392354 334 ntBASIC14.14□□□□□ -0.15
HOXA3O43365 SPDYE21P-201ENST00000413323 827 ntBASIC14.14□□□□□ -0.15
HOXA3O43365 AC007967.2-201ENST00000432613 625 ntBASIC14.14□□□□□ -0.15
HOXA3O43365 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.14□□□□□ -0.15
HOXA3O43365 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.14□□□□□ -0.15
HOXA3O43365 RNA5SP416-201ENST00000516838 111 ntBASIC14.14□□□□□ -0.15
HOXA3O43365 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.14□□□□□ -0.15
HOXA3O43365 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.14□□□□□ -0.15
HOXA3O43365 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.14□□□□□ -0.15
HOXA3O43365 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.14□□□□□ -0.15
HOXA3O43365 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.14□□□□□ -0.15
HOXA3O43365 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.14□□□□□ -0.15
HOXA3O43365 AC073592.4-201ENST00000623827 446 ntBASIC14.14□□□□□ -0.15
HOXA3O43365 AC005593.1-201ENST00000624894 515 ntBASIC14.14□□□□□ -0.15
HOXA3O43365 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HOXA3O43365 AC005332.8-201ENST00000622750 2735 ntBASIC14.14□□□□□ -0.15
HOXA3O43365 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms