Protein–RNA interactions for Protein: O15126

SCAMP1, Secretory carrier-associated membrane protein 1, humanhuman

Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1O15126 AC104109.2-201ENST00000602919 1418 ntBASIC17.39■□□□□ 0.38
SCAMP1O15126 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
SCAMP1O15126 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP1O15126 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP1O15126 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP1O15126 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP1O15126 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP1O15126 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP1O15126 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.39■□□□□ 0.37
SCAMP1O15126 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.39■□□□□ 0.37
SCAMP1O15126 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SCAMP1O15126 AC092910.1-201ENST00000482027 1129 ntBASIC17.39■□□□□ 0.37
SCAMP1O15126 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.39■□□□□ 0.37
SCAMP1O15126 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.39■□□□□ 0.37
SCAMP1O15126 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP1O15126 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.39■□□□□ 0.37
SCAMP1O15126 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.39■□□□□ 0.37
SCAMP1O15126 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP1O15126 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SCAMP1O15126 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP1O15126 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.39■□□□□ 0.37
SCAMP1O15126 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SCAMP1O15126 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP1O15126 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP1O15126 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP1O15126 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
SCAMP1O15126 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.39■□□□□ 0.37
SCAMP1O15126 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SCAMP1O15126 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.39■□□□□ 0.37
SCAMP1O15126 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP1O15126 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.39■□□□□ 0.37
SCAMP1O15126 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SCAMP1O15126 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.39■□□□□ 0.37
SCAMP1O15126 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP1O15126 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP1O15126 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.39■□□□□ 0.37
SCAMP1O15126 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.38■□□□□ 0.37
SCAMP1O15126 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP1O15126 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP1O15126 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SCAMP1O15126 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.38■□□□□ 0.37
SCAMP1O15126 AC026471.1-201ENST00000564629 3026 ntBASIC17.38■□□□□ 0.37
SCAMP1O15126 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP1O15126 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.38■□□□□ 0.37
SCAMP1O15126 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.38■□□□□ 0.37
SCAMP1O15126 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP1O15126 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP1O15126 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SCAMP1O15126 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.38■□□□□ 0.37
SCAMP1O15126 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP1O15126 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP1O15126 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP1O15126 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP1O15126 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.38■□□□□ 0.37
SCAMP1O15126 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP1O15126 AC098831.1-202ENST00000438821 336 ntBASIC17.38■□□□□ 0.37
SCAMP1O15126 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.38■□□□□ 0.37
SCAMP1O15126 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.38■□□□□ 0.37
SCAMP1O15126 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.38■□□□□ 0.37
SCAMP1O15126 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP1O15126 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.38■□□□□ 0.37
SCAMP1O15126 AC027601.4-201ENST00000611259 610 ntBASIC17.38■□□□□ 0.37
SCAMP1O15126 AC107918.4-202ENST00000641623 219 ntBASIC17.38■□□□□ 0.37
SCAMP1O15126 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP1O15126 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP1O15126 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.38■□□□□ 0.37
SCAMP1O15126 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP1O15126 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.38■□□□□ 0.37
SCAMP1O15126 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP1O15126 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP1O15126 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SCAMP1O15126 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SCAMP1O15126 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.38■□□□□ 0.37
SCAMP1O15126 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.37■□□□□ 0.37
SCAMP1O15126 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP1O15126 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.37■□□□□ 0.37
SCAMP1O15126 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP1O15126 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP1O15126 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.37■□□□□ 0.37
SCAMP1O15126 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP1O15126 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP1O15126 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP1O15126 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP1O15126 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP1O15126 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP1O15126 BX842568.4-201ENST00000421222 227 ntBASIC17.37■□□□□ 0.37
SCAMP1O15126 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.37■□□□□ 0.37
SCAMP1O15126 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP1O15126 AC122714.2-201ENST00000502787 707 ntBASIC17.37■□□□□ 0.37
SCAMP1O15126 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.37■□□□□ 0.37
SCAMP1O15126 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SCAMP1O15126 AC105339.3-201ENST00000560043 636 ntBASIC17.37■□□□□ 0.37
SCAMP1O15126 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP1O15126 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP1O15126 FAM197Y3-203ENST00000618346 717 ntBASIC17.37■□□□□ 0.37
SCAMP1O15126 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP1O15126 NEFHP1-201ENST00000412845 2629 ntBASIC17.37■□□□□ 0.37
SCAMP1O15126 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.37■□□□□ 0.37
SCAMP1O15126 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.37■□□□□ 0.37
SCAMP1O15126 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms