Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.3□□□□□ -0.28
SOCS3O14543 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SOCS3O14543 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SOCS3O14543 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SOCS3O14543 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.3□□□□□ -0.28
SOCS3O14543 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
SOCS3O14543 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.3□□□□□ -0.28
SOCS3O14543 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SOCS3O14543 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.3□□□□□ -0.28
SOCS3O14543 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.3□□□□□ -0.28
SOCS3O14543 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SOCS3O14543 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SOCS3O14543 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SOCS3O14543 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SOCS3O14543 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.3□□□□□ -0.28
SOCS3O14543 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SOCS3O14543 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.29□□□□□ -0.28
SOCS3O14543 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 AC010460.3-201ENST00000511359 1579 ntBASIC13.29□□□□□ -0.28
SOCS3O14543 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.29□□□□□ -0.28
SOCS3O14543 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.29□□□□□ -0.28
SOCS3O14543 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.29□□□□□ -0.28
SOCS3O14543 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SOCS3O14543 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SOCS3O14543 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
SOCS3O14543 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.29□□□□□ -0.28
SOCS3O14543 TSPY22P-201ENST00000427496 604 ntBASIC13.29□□□□□ -0.28
SOCS3O14543 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.29□□□□□ -0.28
SOCS3O14543 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.29□□□□□ -0.28
SOCS3O14543 GUSBP12-201ENST00000513727 720 ntBASIC13.29□□□□□ -0.28
SOCS3O14543 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 AL592071.1-201ENST00000611956 408 ntBASIC13.29□□□□□ -0.28
SOCS3O14543 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.29□□□□□ -0.28
SOCS3O14543 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SOCS3O14543 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SOCS3O14543 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SOCS3O14543 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SOCS3O14543 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.29□□□□□ -0.28
SOCS3O14543 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.28□□□□□ -0.28
SOCS3O14543 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SOCS3O14543 LYSMD4-203ENST00000378904 2122 ntBASIC13.28□□□□□ -0.28
SOCS3O14543 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SOCS3O14543 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.28□□□□□ -0.28
SOCS3O14543 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SOCS3O14543 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
SOCS3O14543 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SOCS3O14543 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SOCS3O14543 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SOCS3O14543 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SOCS3O14543 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SOCS3O14543 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SOCS3O14543 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SOCS3O14543 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.28□□□□□ -0.28
SOCS3O14543 COX5BP2-201ENST00000392354 334 ntBASIC13.28□□□□□ -0.28
SOCS3O14543 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SOCS3O14543 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.28□□□□□ -0.28
SOCS3O14543 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SOCS3O14543 AL845331.1-201ENST00000424978 1190 ntBASIC13.28□□□□□ -0.28
SOCS3O14543 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.28□□□□□ -0.28
SOCS3O14543 AC002558.1-201ENST00000488906 803 ntBASIC13.28□□□□□ -0.28
SOCS3O14543 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SOCS3O14543 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.28□□□□□ -0.28
SOCS3O14543 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.28□□□□□ -0.28
SOCS3O14543 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.28□□□□□ -0.28
SOCS3O14543 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.28□□□□□ -0.28
SOCS3O14543 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.28□□□□□ -0.28
SOCS3O14543 AC011498.5-201ENST00000592027 486 ntBASIC13.28□□□□□ -0.28
SOCS3O14543 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.28□□□□□ -0.28
SOCS3O14543 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.28□□□□□ -0.28
SOCS3O14543 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.28□□□□□ -0.28
SOCS3O14543 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SOCS3O14543 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SOCS3O14543 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SOCS3O14543 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.28□□□□□ -0.28
SOCS3O14543 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SOCS3O14543 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SOCS3O14543 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms