Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PIK3C2AO00443 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC23.39■■□□□ 1.33
PIK3C2AO00443 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PIK3C2AO00443 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PIK3C2AO00443 FAM8A3P-201ENST00000427218 844 ntBASIC23.38■■□□□ 1.33
PIK3C2AO00443 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC23.38■■□□□ 1.33
PIK3C2AO00443 AC090164.3-201ENST00000610780 2143 ntBASIC23.38■■□□□ 1.33
PIK3C2AO00443 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
PIK3C2AO00443 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PIK3C2AO00443 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PIK3C2AO00443 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
PIK3C2AO00443 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC23.38■■□□□ 1.33
PIK3C2AO00443 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC23.38■■□□□ 1.33
PIK3C2AO00443 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PIK3C2AO00443 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
PIK3C2AO00443 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PIK3C2AO00443 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC23.38■■□□□ 1.33
PIK3C2AO00443 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PIK3C2AO00443 NEK7-201ENST00000367383 586 ntTSL 2 BASIC23.38■■□□□ 1.33
PIK3C2AO00443 WDR53-203ENST00000429115 683 ntTSL 2 BASIC23.38■■□□□ 1.33
PIK3C2AO00443 HLA-J-203ENST00000494367 1087 ntBASIC23.38■■□□□ 1.33
PIK3C2AO00443 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PIK3C2AO00443 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC23.38■■□□□ 1.33
PIK3C2AO00443 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
PIK3C2AO00443 HARS-203ENST00000431330 1774 ntTSL 2 BASIC23.37■■□□□ 1.33
PIK3C2AO00443 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PIK3C2AO00443 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
PIK3C2AO00443 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PIK3C2AO00443 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PIK3C2AO00443 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PIK3C2AO00443 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
PIK3C2AO00443 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC23.37■■□□□ 1.33
PIK3C2AO00443 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PIK3C2AO00443 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC23.37■■□□□ 1.33
PIK3C2AO00443 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PIK3C2AO00443 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC23.37■■□□□ 1.33
PIK3C2AO00443 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PIK3C2AO00443 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PIK3C2AO00443 BCRP1-201ENST00000444246 691 ntBASIC23.37■■□□□ 1.33
PIK3C2AO00443 AC112191.1-201ENST00000523689 701 ntBASIC23.37■■□□□ 1.33
PIK3C2AO00443 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC23.37■■□□□ 1.33
PIK3C2AO00443 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
PIK3C2AO00443 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PIK3C2AO00443 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
PIK3C2AO00443 HNRNPRP1-201ENST00000453465 1695 ntBASIC23.37■■□□□ 1.33
PIK3C2AO00443 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PIK3C2AO00443 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PIK3C2AO00443 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PIK3C2AO00443 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC23.37■■□□□ 1.33
PIK3C2AO00443 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PIK3C2AO00443 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
PIK3C2AO00443 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PIK3C2AO00443 AC138028.4-201ENST00000564984 1845 ntBASIC23.36■■□□□ 1.33
PIK3C2AO00443 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PIK3C2AO00443 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PIK3C2AO00443 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC23.36■■□□□ 1.33
PIK3C2AO00443 SLBP-205ENST00000488267 987 ntTSL 2 BASIC23.36■■□□□ 1.33
PIK3C2AO00443 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC23.36■■□□□ 1.33
PIK3C2AO00443 KRT8P48-201ENST00000515599 1220 ntBASIC23.36■■□□□ 1.33
PIK3C2AO00443 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.36■■□□□ 1.33
PIK3C2AO00443 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
PIK3C2AO00443 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PIK3C2AO00443 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC23.36■■□□□ 1.33
PIK3C2AO00443 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PIK3C2AO00443 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC23.35■■□□□ 1.33
PIK3C2AO00443 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PIK3C2AO00443 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PIK3C2AO00443 SYS1-203ENST00000414310 795 ntTSL 3 BASIC23.35■■□□□ 1.33
PIK3C2AO00443 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC23.35■■□□□ 1.33
PIK3C2AO00443 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC23.35■■□□□ 1.33
PIK3C2AO00443 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PIK3C2AO00443 AC004835.2-201ENST00000603762 682 ntBASIC23.35■■□□□ 1.33
PIK3C2AO00443 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC23.35■■□□□ 1.33
PIK3C2AO00443 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC23.35■■□□□ 1.33
PIK3C2AO00443 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PIK3C2AO00443 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PIK3C2AO00443 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PIK3C2AO00443 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC23.35■■□□□ 1.33
PIK3C2AO00443 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC23.35■■□□□ 1.33
PIK3C2AO00443 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC23.35■■□□□ 1.33
PIK3C2AO00443 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC23.35■■□□□ 1.33
PIK3C2AO00443 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC23.35■■□□□ 1.33
PIK3C2AO00443 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC23.35■■□□□ 1.33
PIK3C2AO00443 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC23.35■■□□□ 1.33
PIK3C2AO00443 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PIK3C2AO00443 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC23.34■■□□□ 1.33
PIK3C2AO00443 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PIK3C2AO00443 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PIK3C2AO00443 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PIK3C2AO00443 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PIK3C2AO00443 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PIK3C2AO00443 FAM185BP-201ENST00000443595 716 ntBASIC23.34■■□□□ 1.33
PIK3C2AO00443 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC23.34■■□□□ 1.33
PIK3C2AO00443 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC23.34■■□□□ 1.33
PIK3C2AO00443 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PIK3C2AO00443 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC23.34■■□□□ 1.33
PIK3C2AO00443 REXO1L3P-201ENST00000622202 1288 ntBASIC23.34■■□□□ 1.33
PIK3C2AO00443 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
PIK3C2AO00443 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC23.34■■□□□ 1.33
PIK3C2AO00443 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms