Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.3■□□□□ 0.36
CDC7O00311 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.3■□□□□ 0.36
CDC7O00311 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDC7O00311 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC7O00311 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC7O00311 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC7O00311 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDC7O00311 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDC7O00311 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
CDC7O00311 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC7O00311 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC7O00311 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC7O00311 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC7O00311 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDC7O00311 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC7O00311 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CDC7O00311 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDC7O00311 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.29■□□□□ 0.36
CDC7O00311 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC7O00311 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CDC7O00311 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.29■□□□□ 0.36
CDC7O00311 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC7O00311 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC7O00311 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC7O00311 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.29■□□□□ 0.36
CDC7O00311 AC005332.1-201ENST00000577698 1310 ntBASIC17.29■□□□□ 0.36
CDC7O00311 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CDC7O00311 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC7O00311 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CDC7O00311 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.29■□□□□ 0.36
CDC7O00311 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC7O00311 COX5BP2-201ENST00000392354 334 ntBASIC17.29■□□□□ 0.36
CDC7O00311 AC007967.3-201ENST00000434308 558 ntBASIC17.29■□□□□ 0.36
CDC7O00311 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDC7O00311 KRT8P26-201ENST00000534154 1276 ntBASIC17.29■□□□□ 0.36
CDC7O00311 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.29■□□□□ 0.36
CDC7O00311 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.29■□□□□ 0.36
CDC7O00311 AC090616.6-201ENST00000582640 721 ntBASIC17.29■□□□□ 0.36
CDC7O00311 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CDC7O00311 AC005336.2-201ENST00000593183 939 ntBASIC17.29■□□□□ 0.36
CDC7O00311 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.29■□□□□ 0.36
CDC7O00311 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.29■□□□□ 0.36
CDC7O00311 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC7O00311 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC7O00311 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.29■□□□□ 0.36
CDC7O00311 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.29■□□□□ 0.36
CDC7O00311 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC7O00311 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC7O00311 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CDC7O00311 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CDC7O00311 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC7O00311 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDC7O00311 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDC7O00311 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC7O00311 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDC7O00311 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.29■□□□□ 0.36
CDC7O00311 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
CDC7O00311 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDC7O00311 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 FAM210CP-201ENST00000445714 574 ntBASIC17.28■□□□□ 0.36
CDC7O00311 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.28■□□□□ 0.36
CDC7O00311 FAM86EP-206ENST00000510506 987 ntBASIC17.28■□□□□ 0.36
CDC7O00311 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.28■□□□□ 0.36
CDC7O00311 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.28■□□□□ 0.36
CDC7O00311 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CDC7O00311 AL353801.3-201ENST00000609898 542 ntBASIC17.28■□□□□ 0.36
CDC7O00311 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.28■□□□□ 0.36
CDC7O00311 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDC7O00311 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 AC125634.1-201ENST00000438758 1403 ntBASIC17.28■□□□□ 0.36
CDC7O00311 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.28■□□□□ 0.36
CDC7O00311 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.28■□□□□ 0.36
CDC7O00311 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CDC7O00311 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.28■□□□□ 0.36
CDC7O00311 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDC7O00311 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDC7O00311 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDC7O00311 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDC7O00311 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDC7O00311 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDC7O00311 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDC7O00311 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CDC7O00311 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms