Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TLR4O00206 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TLR4O00206 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TLR4O00206 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TLR4O00206 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TLR4O00206 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TLR4O00206 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TLR4O00206 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TLR4O00206 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TLR4O00206 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TLR4O00206 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TLR4O00206 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TLR4O00206 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TLR4O00206 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TLR4O00206 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TLR4O00206 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.44■□□□□ 0.38
TLR4O00206 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TLR4O00206 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.44■□□□□ 0.38
TLR4O00206 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TLR4O00206 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.44■□□□□ 0.38
TLR4O00206 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TLR4O00206 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.44■□□□□ 0.38
TLR4O00206 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TLR4O00206 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TLR4O00206 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.44■□□□□ 0.38
TLR4O00206 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.44■□□□□ 0.38
TLR4O00206 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.44■□□□□ 0.38
TLR4O00206 RNA5SP416-201ENST00000516838 111 ntBASIC17.44■□□□□ 0.38
TLR4O00206 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.44■□□□□ 0.38
TLR4O00206 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.44■□□□□ 0.38
TLR4O00206 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.44■□□□□ 0.38
TLR4O00206 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.44■□□□□ 0.38
TLR4O00206 AC073592.5-201ENST00000624854 528 ntBASIC17.44■□□□□ 0.38
TLR4O00206 PGM5P2-202ENST00000637225 1043 ntBASIC17.44■□□□□ 0.38
TLR4O00206 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TLR4O00206 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TLR4O00206 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TLR4O00206 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.44■□□□□ 0.38
TLR4O00206 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.44■□□□□ 0.38
TLR4O00206 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TLR4O00206 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TLR4O00206 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TLR4O00206 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR4O00206 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TLR4O00206 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TLR4O00206 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR4O00206 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.43■□□□□ 0.38
TLR4O00206 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR4O00206 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TLR4O00206 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.43■□□□□ 0.38
TLR4O00206 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR4O00206 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR4O00206 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR4O00206 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TLR4O00206 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR4O00206 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR4O00206 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.43■□□□□ 0.38
TLR4O00206 KRT18P27-201ENST00000427733 1299 ntBASIC17.43■□□□□ 0.38
TLR4O00206 AC009947.1-201ENST00000444350 727 ntBASIC17.43■□□□□ 0.38
TLR4O00206 AC092183.1-201ENST00000469884 875 ntBASIC17.43■□□□□ 0.38
TLR4O00206 AC040169.1-201ENST00000565382 521 ntBASIC17.43■□□□□ 0.38
TLR4O00206 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TLR4O00206 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.43■□□□□ 0.38
TLR4O00206 AC005593.1-201ENST00000624894 515 ntBASIC17.43■□□□□ 0.38
TLR4O00206 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TLR4O00206 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TLR4O00206 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR4O00206 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR4O00206 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.43■□□□□ 0.38
TLR4O00206 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR4O00206 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
TLR4O00206 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR4O00206 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TLR4O00206 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
TLR4O00206 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR4O00206 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TLR4O00206 NOC2LP1-202ENST00000452600 2235 ntBASIC17.43■□□□□ 0.38
TLR4O00206 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TLR4O00206 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
TLR4O00206 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TLR4O00206 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
TLR4O00206 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TLR4O00206 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.42■□□□□ 0.38
TLR4O00206 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.42■□□□□ 0.38
TLR4O00206 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.42■□□□□ 0.38
TLR4O00206 UPF3AP3-201ENST00000420996 769 ntBASIC17.42■□□□□ 0.38
TLR4O00206 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.42■□□□□ 0.38
TLR4O00206 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.42■□□□□ 0.38
TLR4O00206 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.42■□□□□ 0.38
TLR4O00206 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.42■□□□□ 0.38
TLR4O00206 AL139424.1-201ENST00000607572 797 ntBASIC17.42■□□□□ 0.38
TLR4O00206 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.42■□□□□ 0.38
TLR4O00206 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.42■□□□□ 0.38
TLR4O00206 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TLR4O00206 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TLR4O00206 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.42■□□□□ 0.38
TLR4O00206 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TLR4O00206 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TLR4O00206 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.42■□□□□ 0.38
TLR4O00206 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms