Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 TK2-216ENST00000564917 1156 ntTSL 3 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 AC092171.4-201ENST00000609130 632 ntBASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
CHKB-CPT1BH3BT56 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
CHKB-CPT1BH3BT56 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC9.77□□□□□ -0.84
CHKB-CPT1BH3BT56 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
CHKB-CPT1BH3BT56 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.84
CHKB-CPT1BH3BT56 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
CHKB-CPT1BH3BT56 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
CHKB-CPT1BH3BT56 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC9.77□□□□□ -0.84
CHKB-CPT1BH3BT56 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
CHKB-CPT1BH3BT56 AC022188.1-201ENST00000620960 1664 ntBASIC9.77□□□□□ -0.84
CHKB-CPT1BH3BT56 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
CHKB-CPT1BH3BT56 AC021242.3-201ENST00000607598 1377 ntBASIC9.77□□□□□ -0.84
CHKB-CPT1BH3BT56 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
CHKB-CPT1BH3BT56 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
CHKB-CPT1BH3BT56 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
CHKB-CPT1BH3BT56 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
CHKB-CPT1BH3BT56 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
CHKB-CPT1BH3BT56 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 GRAMD4P7-201ENST00000578182 1232 ntBASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 EXOG-217ENST00000630638 197 ntTSL 5 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 AC083906.6-201ENST00000641366 219 ntBASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms