Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.39■□□□□ 0.85
USP17L11C9JVI0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
USP17L11C9JVI0 AC019129.2-201ENST00000609837 1235 ntBASIC20.39■□□□□ 0.85
USP17L11C9JVI0 AC116407.2-201ENST00000613639 860 ntBASIC20.39■□□□□ 0.85
USP17L11C9JVI0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.39■□□□□ 0.85
USP17L11C9JVI0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP17L11C9JVI0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
USP17L11C9JVI0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
USP17L11C9JVI0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP17L11C9JVI0 AC138028.4-201ENST00000564984 1845 ntBASIC20.39■□□□□ 0.85
USP17L11C9JVI0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.39■□□□□ 0.85
USP17L11C9JVI0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.38■□□□□ 0.85
USP17L11C9JVI0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 AC134684.3-201ENST00000641758 218 ntBASIC20.38■□□□□ 0.85
USP17L11C9JVI0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP17L11C9JVI0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 CRYGEP-201ENST00000412192 528 ntBASIC20.37■□□□□ 0.85
USP17L11C9JVI0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 FLJ13224-201ENST00000313737 1514 ntBASIC20.37■□□□□ 0.85
USP17L11C9JVI0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP17L11C9JVI0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 MCCD1P2-201ENST00000423228 335 ntBASIC20.36■□□□□ 0.85
USP17L11C9JVI0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 AC109462.3-201ENST00000573934 613 ntBASIC20.36■□□□□ 0.85
USP17L11C9JVI0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms