Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SRRM4A7MD48 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 AC009053.2-201ENST00000563701 2365 ntBASIC14.19□□□□□ -0.14
SRRM4A7MD48 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SRRM4A7MD48 AC097374.2-201ENST00000618617 1306 ntBASIC14.19□□□□□ -0.14
SRRM4A7MD48 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.19□□□□□ -0.14
SRRM4A7MD48 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.19□□□□□ -0.14
SRRM4A7MD48 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SRRM4A7MD48 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.19□□□□□ -0.14
SRRM4A7MD48 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SRRM4A7MD48 TSPY22P-201ENST00000427496 604 ntBASIC14.19□□□□□ -0.14
SRRM4A7MD48 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.19□□□□□ -0.14
SRRM4A7MD48 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.19□□□□□ -0.14
SRRM4A7MD48 RN7SL606P-201ENST00000472779 293 ntBASIC14.19□□□□□ -0.14
SRRM4A7MD48 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SRRM4A7MD48 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SRRM4A7MD48 LINC01238-205ENST00000567549 1107 ntBASIC14.19□□□□□ -0.14
SRRM4A7MD48 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.19□□□□□ -0.14
SRRM4A7MD48 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.19□□□□□ -0.14
SRRM4A7MD48 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
SRRM4A7MD48 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.19□□□□□ -0.14
SRRM4A7MD48 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.19□□□□□ -0.14
SRRM4A7MD48 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.19□□□□□ -0.14
SRRM4A7MD48 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.19□□□□□ -0.14
SRRM4A7MD48 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRRM4A7MD48 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.18□□□□□ -0.14
SRRM4A7MD48 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.18□□□□□ -0.14
SRRM4A7MD48 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.18□□□□□ -0.14
SRRM4A7MD48 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.18□□□□□ -0.14
SRRM4A7MD48 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SRRM4A7MD48 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
SRRM4A7MD48 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.18□□□□□ -0.14
SRRM4A7MD48 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.18□□□□□ -0.14
SRRM4A7MD48 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SRRM4A7MD48 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
SRRM4A7MD48 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SRRM4A7MD48 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.18□□□□□ -0.14
SRRM4A7MD48 GUSBP12-201ENST00000513727 720 ntBASIC14.18□□□□□ -0.14
SRRM4A7MD48 AL136038.3-201ENST00000561909 1096 ntBASIC14.18□□□□□ -0.14
SRRM4A7MD48 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 AC011498.5-201ENST00000592027 486 ntBASIC14.18□□□□□ -0.14
SRRM4A7MD48 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SRRM4A7MD48 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.18□□□□□ -0.14
SRRM4A7MD48 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.18□□□□□ -0.14
SRRM4A7MD48 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.18□□□□□ -0.14
SRRM4A7MD48 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SRRM4A7MD48 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.18□□□□□ -0.14
SRRM4A7MD48 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRRM4A7MD48 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms