Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 KRT16P4-201ENST00000453883 522 ntBASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.73■□□□□ 0.91
PTPDC1A2A3K4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 AC138932.1-201ENST00000534164 6830 ntBASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 AC108860.2-201ENST00000562760 2183 ntBASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 HLA-J-201ENST00000462773 1622 ntBASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 AC009078.2-202ENST00000463353 338 ntBASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 AC096582.2-201ENST00000510860 516 ntBASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 BNIP3P18-201ENST00000593976 575 ntBASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPDC1A2A3K4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 AC090340.1-201ENST00000620778 4980 ntBASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 AC104692.2-201ENST00000603054 253 ntBASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.71■□□□□ 0.91
PTPDC1A2A3K4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
PTPDC1A2A3K4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
PTPDC1A2A3K4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPDC1A2A3K4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms