Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 PCDH8P1-201ENST00000428983 2773 ntBASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 INGX-201ENST00000359239 846 ntBASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 AC098590.1-201ENST00000468126 897 ntBASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV5A0A0B4J249 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV5A0A0B4J249 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.71□□□□□ -0.22
TRAV5A0A0B4J249 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV5A0A0B4J249 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.71□□□□□ -0.22
TRAV5A0A0B4J249 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.71□□□□□ -0.22
TRAV5A0A0B4J249 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV5A0A0B4J249 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV5A0A0B4J249 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 MIR1238-201ENST00000408483 83 ntBASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 AC009947.2-201ENST00000444014 672 ntBASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 AC008687.5-201ENST00000593746 558 ntBASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 Z99916.2-201ENST00000604037 246 ntBASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms