Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 AC026471.1-201ENST00000564629 3026 ntBASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 KRT19P2-202ENST00000557173 1012 ntBASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 AL353135.1-201ENST00000606729 504 ntBASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 AC007064.4-201ENST00000637740 555 ntBASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 AC009336.1-201ENST00000608941 1553 ntBASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 AC004408.2-201ENST00000623613 2777 ntBASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC187A0A096LP49 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 FAM58CP-201ENST00000435741 640 ntBASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 AL031432.2-201ENST00000566714 459 ntBASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 AL928711.1-201ENST00000570165 459 ntBASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CCDC187A0A096LP49 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 AL096828.2-201ENST00000567259 1965 ntBASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 LETM1P2-201ENST00000597330 2178 ntBASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 LINC00982-205ENST00000420957 435 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms