Protein–RNA interactions for Protein: Q9Y6R1

SLC4A4, Electrogenic sodium bicarbonate cotransporter 1, humanhuman

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A4Q9Y6R1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 AC018470.1-201ENST00000624790 3129 ntBASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 HNRNPDP1-201ENST00000439535 754 ntBASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 AC079776.4-201ENST00000511039 504 ntBASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 RNA5SP419-201ENST00000515908 135 ntBASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 STK25P1-201ENST00000585406 838 ntBASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 MTDHP4-201ENST00000600287 670 ntBASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 AC073592.4-201ENST00000623827 446 ntBASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC4A4Q9Y6R1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 SIGLEC16-201ENST00000599858 1437 ntBASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 KLF4P1-201ENST00000412782 1185 ntBASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 AL031284.1-201ENST00000419297 478 ntBASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 AC025062.2-201ENST00000605477 670 ntBASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC4A4Q9Y6R1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 AC148477.5-201ENST00000625164 1645 ntBASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 AC003669.1-201ENST00000334569 611 ntBASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 AL020989.1-201ENST00000422979 469 ntBASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 RPS2P1-201ENST00000434010 821 ntBASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 AP001005.1-201ENST00000571755 1248 ntBASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC4A4Q9Y6R1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SLC4A4Q9Y6R1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
SLC4A4Q9Y6R1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SLC4A4Q9Y6R1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC4A4Q9Y6R1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC4A4Q9Y6R1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC4A4Q9Y6R1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC4A4Q9Y6R1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC4A4Q9Y6R1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC4A4Q9Y6R1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SLC4A4Q9Y6R1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SLC4A4Q9Y6R1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.96■□□□□ 0.95
SLC4A4Q9Y6R1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC4A4Q9Y6R1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.96■□□□□ 0.95
SLC4A4Q9Y6R1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC4A4Q9Y6R1 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC4A4Q9Y6R1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms