Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 AL390719.2-201ENST00000606993 987 ntBASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 COX5BP2-201ENST00000392354 334 ntBASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 AC005521.1-201ENST00000393351 872 ntBASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 AL359075.1-203ENST00000462729 1002 ntBASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 AC002558.1-201ENST00000488906 803 ntBASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA3Q9Y5H8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 AC010460.3-201ENST00000511359 1579 ntBASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 VENTXP5-201ENST00000523979 775 ntBASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 RNF126P1-202ENST00000569893 925 ntBASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 AC073912.3-201ENST00000624414 853 ntBASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA3Q9Y5H8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.39■□□□□ 0.54
PCDHA3Q9Y5H8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
PCDHA3Q9Y5H8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
PCDHA3Q9Y5H8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.39■□□□□ 0.54
PCDHA3Q9Y5H8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHA3Q9Y5H8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHA3Q9Y5H8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.39■□□□□ 0.53
PCDHA3Q9Y5H8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHA3Q9Y5H8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PCDHA3Q9Y5H8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHA3Q9Y5H8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PCDHA3Q9Y5H8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
PCDHA3Q9Y5H8 AC112907.2-201ENST00000448639 330 ntBASIC18.39■□□□□ 0.53
PCDHA3Q9Y5H8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHA3Q9Y5H8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHA3Q9Y5H8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.39■□□□□ 0.53
PCDHA3Q9Y5H8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms